Applications of genetic markers in cytogenetic manipulation of the wheat genomes

Genome ◽  
1989 ◽  
Vol 31 (1) ◽  
pp. 137-142 ◽  
Author(s):  
M. D. Gale ◽  
P. J. Sharp ◽  
S. Chao ◽  
C. N. Law
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Genetic Maps ◽  
Linkage Groups ◽  
Large Genome ◽  
Large Genome Size ◽  
Restriction Fragment Length

A molecular map of wheat, Triticum aestivum, is being developed. Problems associated with the large genome size, the large number of linkage groups, polyploidy, and limited polymorphism at the DNA level are being overcome. In addition to the breeding applications expected from the map, various uses for restriction fragment length polymorphism markers as tools in cytogenetic manipulation of wheat chromosomes and those from related species are being found. These include identification of aneuploid genotypes, added precision in intervarietal chromosome manipulations, tests of chromosome stability, identification of alien chromosomes, and marker-aided introgression of genes of agronomic importance from related species.Key words: wheat, restriction fragment length polymorphism, genetic maps, aneuploidy, alien chromosomes.

An integrated restriction fragment length polymorphism - amplified fragment length polymorphism linkage map for cultivated sunflower

Genome ◽  
2001 ◽  
Vol 44 (2) ◽  
pp. 213-221 ◽  
Author(s):  
Melaku Ayele Gedil ◽  
Crispin Wye ◽  
Simon Berry ◽  
Bart Segers ◽  
Johan Peleman ◽  
...  
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Amplified Fragment Length Polymorphism ◽  
Aflp Markers ◽  
Rflp Markers ◽  
Linkage Groups ◽  
Restriction Fragment Length

Restriction fragment length polymorphism (RFLP) maps have been constructed for cultivated sunflower (Helianthus annuus L.) using three independent sets of RFLP probes. The aim of this research was to integrate RFLP markers from two sets with RFLP markers for resistance gene candidate (RGC) and amplified fragment length polymorphism (AFLP) markers. Genomic DNA samples of HA370 and HA372, the parents of the F2 population used to build the map, were screened for AFLPs using 42 primer combinations and RFLPs using 136 cDNA probes (RFLP analyses were performed on DNA digested with EcoRI, HindIII, EcoRV, or DraI). The AFLP primers produced 446 polymorphic and 1101 monomorphic bands between HA370 and HA372. The integrated map was built by genotyping 296 AFLP and 104 RFLP markers on 180 HA370 × HA372 F2 progeny (the AFLP marker assays were performed using 18 primer combinations). The HA370 × HA372 map comprised 17 linkage groups, presumably corresponding to the 17 haploid chromosomes of sunflower, had a mean density of 3.3 cM, and was 1326 cM long. Six RGC RFLP loci were polymorphic and mapped to three linkage groups (LG8, LG13, and LG15). AFLP markers were densely clustered on several linkage groups, and presumably reside in centromeric regions where recombination is reduced and the ratio of genetic to physical distance is low. Strategies for targeting markers to euchromatic DNA need to be tested in sunflower. The HA370 × HA372 map integrated 14 of 17 linkage groups from two independent RFLP maps. Three linkage groups were devoid of RFLP markers from one of the two maps.Key words: amplified fragment length polymorphism (AFLP), restriction fragment length polymorphism (RFLP), Helianthus, sunflower, genetic map.

An RFLP-based linkage map of oats based on a cross between two diploid taxa (Avena atlantica × A. hirtula)

Genome ◽  
1992 ◽  
Vol 35 (5) ◽  
pp. 765-771 ◽  
Author(s):  
L. S. O'Donoughue ◽  
Z. Wang ◽  
M. Röder ◽  
B. Kneen ◽  
M. Leggett ◽  
...  
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Rflp Markers ◽  
Linkage Groups ◽  
Marker Selection ◽  
A Genome ◽  
Restriction Fragment Length

A restriction fragment length polymorphism (RFLP) map for the A genome of Avena has been developed using F3 families from the cross A. atlantica × A. hirtula. The main source of markers were an oat cDNA and a barley cDNA library. A total of 194 RFLP markers was used, 192 of which were mapped or assigned to linkage groups. Seven main linkage groups, presumably corresponding to the seven chromosomes of the haploid genome, were identified. The linkage groups varied in size from 30 to 118 cM for a total map length of 614 cM. This map provides a tool for the interpretation of genome organization in Avena and for marker selection in the development of a map of hexaploid oats.Key words: restriction fragment length polymorphism, Avena, mapping.

Restriction fragment length polymorphism in MC3R and MC4R genes and their association with carcass traits in chicken

2011 ◽  
Vol 36 (5) ◽  
pp. 556-560
Author(s):  
Ding-guo CAO ◽  
Yan ZHOU ◽  
Qiu-xia LEI ◽  
Hai-xia HAN ◽  
Fu-wei LI ◽  
...  
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Carcass Traits ◽  
Restriction Fragment Length

Restriction Fragment Length Polymorphism in a Subclass of the ‘Mandarin’ Soybean Cytoplasm

Crop Science ◽  
1989 ◽  
Vol 29 (6) ◽  
pp. 1554-1559 ◽  
Author(s):  
Elizabeth A. Grabau ◽  
William H. Davis ◽  
Burle G. Gengenbach
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Restriction Fragment Length

Restriction Fragment Length Polymorphism in Soybean Germplasm of the Southern USA

Crop Science ◽  
1993 ◽  
Vol 33 (6) ◽  
pp. 1169-1176 ◽  
Author(s):  
H. T. Skorupska ◽  
R. C. Shoemaker ◽  
A. Warner ◽  
E. R. Shipe ◽  
W. C. Bridges
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Soybean Germplasm ◽  
Restriction Fragment Length

scholarly journals A southern analysis of Rh blood group genes: association between restriction fragment length polymorphism patterns and Rh serotypes

Blood ◽  
1994 ◽  
Vol 83 (2) ◽  
pp. 566-572 ◽  
Author(s):  
CA Hyland ◽  
LC Wolter ◽  
YW Liew ◽  
A Saul
Keyword(s):  
Restriction Fragment Length Polymorphism ◽  
Blood Group ◽  
Restriction Fragment ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Gene Dosage ◽  
Southern Analysis ◽  
Rh Blood Group ◽  
Restriction Fragment Length

Abstract Polymorphisms within the Rh blood group system have been defined by serologic agglutination methods, but have not yet been defined at the DNA level. Two closely related genes associated with the Rh D antigen and with the Rh C/c and E/e antigens have been cloned. We used a Southern analysis incorporating probes to the 5′ and 3′ regions of the Rh C, E gene and D gene to identify polymorphisms associated with Rh C/c and E/e antigens, respectively. The D gene dosage could be determined by comparing the relative intensities of the D bands with bands from the 5′ and 3′ region of the Rh C, E gene. The concordance between restriction fragment length polymorphism (RFLP) patterns and serologic phenotypes for 102 randomly selected blood donors was 100% for C, e, and D, 94.8% for c, and 94.3% for E. The data are consistent with the sequences encoding the C/c epitopes residing on the 5′ side of those for the E/e epitopes. All samples discordant for the 3′ probe and E had the cE (r″) serotype. These data show that the gene coding for the cE serotype is different in Rh-positive and -negative individuals. The study demonstrates that Rh DNA typing, including D gene dosage measurements and Rh gene haplotyping, may supplement traditional serotyping methods in transfusion medicine.

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