Chromosome evolution in kangaroos (Marsupialia: Macropodidae): Cross species chromosome painting between the tammar wallaby and rock wallaby spp. with the 2n = 22 ancestral macropodid karyotype

Genome ◽  
1999 ◽  
Vol 42 (3) ◽  
pp. 525-530 ◽  
Author(s):  
RJ Waugh O'Neill ◽  
MDB Eldridge ◽  
R Toder ◽  
MA Ferguson-Smith ◽  
P C O'Brien ◽  
...  
Keyword(s):  
Chromosome Painting ◽  
Chromosome Evolution ◽  
Karyotype Evolution ◽  
Tammar Wallaby ◽  
Fusion Process ◽  
Ancestral Karyotype ◽  
Karyotypic Diversity ◽  
Species Groups ◽  
Cross Species Chromosome Painting ◽  
Karyotype Stability

Marsupial mammals show extraordinary karyotype stability, with 2n = 14 considered ancestral. However, macropodid marsupials (kangaroos and wallabies) exhibit a considerable variety of karyotypes, with a hypothesised ancestral karyotype of 2n = 22. Speciation and karyotypic diversity in rock wallabies (Petrogale) is exceptional. We used cross species chromosome painting to examine the chromosome evolution between the tammar wallaby (2n = 16) and three 2n = 22 rock wallaby species groups with the putative ancestral karyotype. Hybridization of chromosome paints prepared from flow sorted chromosomes of the tammar wallaby to Petrogale spp., showed that this ancestral karyotype is largely conserved among 2n = 22 rock wallaby species, and confirmed the identity of ancestral chromosomes which fused to produce the bi-armed chromosomes of the 2n = 16 tammar wallaby. These results illustrate the fission-fusion process of karyotype evolution characteristic of the kangaroo group.

scholarly journals Marsupial chromosome DNA content and genome size assessed from flow karyotypes: invariable low autosomal GC content

2018 ◽  
Vol 5 (8) ◽  
pp. 171539 ◽  
Author(s):  
Fumio Kasai ◽  
Patricia C. M. O'Brien ◽  
Jorge C. Pereira ◽  
Malcolm A. Ferguson-Smith
Keyword(s):  
Genome Size ◽  
Dna Content ◽  
Chromosome Painting ◽  
Gc Content ◽  
Tammar Wallaby ◽  
Individual Chromosome ◽  
Tasmanian Devil ◽  
Marsupial Species ◽  
Cross Species Chromosome Painting ◽  
High Level

Extensive chromosome homologies revealed by cross-species chromosome painting between marsupials have suggested a high level of genome conservation during evolution. Surprisingly, it has been reported that marsupial genome sizes vary by more than 1.2 Gb between species. We have shown previously that individual chromosome sizes and GC content can be measured in flow karyotypes, and have applied this method to compare four marsupial species. Chromosome sizes and GC content were calculated for the grey short-tailed opossum (2 n = 18), tammar wallaby (2 n = 16), Tasmanian devil (2 n = 14) and fat-tailed dunnart (2 n = 14), resulting in genome sizes of 3.41, 3.31, 3.17 and 3.25 Gb, respectively. The findings under the same conditions allow a comparison between the four species, indicating that the genomes of these four species are 1–8% larger than human. We show that marsupial genomes are characterized by a low GC content invariable between autosomes and distinct from the higher GC content of the marsupial × chromosome.

Cross-Species Chromosome Painting Corroborates Microchromosome Fusion during Karyotype Evolution of Birds

2009 ◽  
Vol 126 (3) ◽  
pp. 281-304 ◽  
Author(s):  
T. Hansmann ◽  
I. Nanda ◽  
V. Volobouev ◽  
F. Yang ◽  
M. Schartl ◽  
...  
Keyword(s):  
Chromosome Painting ◽  
Karyotype Evolution ◽  
Evolution Of Birds ◽  
Cross Species Chromosome Painting

Chromosome evolution in bears: reconstructing phylogenetic relationships by cross-species chromosome painting

2004 ◽  
Vol 12 (1) ◽  
pp. 55-63 ◽  
Author(s):  
Ying Tian ◽  
Wenhui Nie ◽  
Jinhuan Wang ◽  
Malcolm A. Ferguson-Smith ◽  
Fengtang Yang
Keyword(s):  
Phylogenetic Relationships ◽  
Chromosome Painting ◽  
Chromosome Evolution ◽  
Cross Species Chromosome Painting

Comparative Chromosome Painting in Two Brazilian Stork Species with Different Diploid Numbers

2019 ◽  
Vol 159 (1) ◽  
pp. 32-38
Author(s):  
Igor C.A. Seligmann ◽  
Ivanete O. Furo ◽  
Michelly S. dos Santos ◽  
Marcella M. Tagliarini ◽  
Cristiane C.D. Araujo ◽  
...  
Keyword(s):  
Chromosome Number ◽  
South America ◽  
Chromosome Painting ◽  
Diploid Number ◽  
Karyotype Evolution ◽  
Gallus Gallus ◽  
Diploid Chromosome Number ◽  
Ancestral Karyotype ◽  
Comparative Chromosome Painting ◽  
The Family

Despite the variation observed in the diploid chromosome number of storks (Ciconiiformes, Ciconiidae), from 2n = 52 to 2n = 78, most reports have relied solely on analyses by conventional staining. As most species have similar macrochromosomes, some authors propose that karyotype evolution involves mainly fusions between microchromosomes, which are highly variable in species with different diploid numbers. In order to verify this hypothesis, in this study, the karyotypes of 2 species of storks from South America with different diploid numbers, the jabiru (Jabiru mycteria, 2n = 56) and the maguary stork (Ciconia maguary, 2n = 72), were analyzed by chromosome painting using whole chromosome probes from the macrochromosomes of Gallus gallus (GGA) and Leucopternis albicollis (LAL). The results revealed that J. mycteria and C. maguary share synteny within chromosome pairs 1-9 and Z. The syntenies to the macrochromosomes of G. gallus are conserved, except for GGA4, which is homologous to 2 different pairs, as in most species of birds. A fusion of GGA8 and GGA9 was observed in both species. Additionally, chromosomes corresponding to GGA4p and GGA6 are fused to other segments that did not hybridize to any of the macrochromosome probes used, suggesting that these segments correspond to microchromosomes. Hence, our data corroborate the proposed hypothesis that karyotype evolution is based on fusions involving microchromosomes. In view of the morphological constancy of the macrochromosome pairs in most Ciconiidae, we propose a putative ancestral karyotype for the family, including the GGA8/GGA9 fusion, and a diploid number of 2n = 78. The use of probes for microchromosome pairs should be the next step in identifying other synapomorphies that may help to clarify the phylogeny of this family.

Karyotype evolution in Rhinolophus bats (Rhinolophidae, Chiroptera) illuminated by cross-species chromosome painting and G-banding comparison

2007 ◽  
Vol 15 (7) ◽  
pp. 835-848 ◽  
Author(s):  
Xiuguang Mao ◽  
Wenhui Nie ◽  
Jinhuan Wang ◽  
Weiting Su ◽  
Lei Ao ◽  
...  
Keyword(s):  
Chromosome Painting ◽  
Karyotype Evolution ◽  
Cross Species Chromosome Painting

scholarly journals Chromosome Painting in Neotropical Long- and Short-Tailed Parrots (Aves, Psittaciformes): Phylogeny and Proposal for a Putative Ancestral Karyotype for Tribe Arini

Genes ◽  
2018 ◽  
Vol 9 (10) ◽  
pp. 491 ◽  
Author(s):  
Ivanete de Oliveira Furo ◽  
Rafael Kretschmer ◽  
Patrícia C. M. O’Brien ◽  
Jorge C. Pereira ◽  
Analía del Valle Garnero ◽  
...  
Keyword(s):  
Chromosome Painting ◽  
Fluorescent In Situ Hybridization ◽  
Diploid Number ◽  
Karyotype Evolution ◽  
Paracentric Inversion ◽  
Ancestral Karyotype ◽  
Acrocentric Chromosomes ◽  
Comparison Of The Results ◽  
Intrachromosomal Rearrangements

: Most Neotropical Psittacidae have a diploid number of 2n = 70, and a dichotomy in chromosome patterns. Long-tailed species have biarmed macrochromosomes, while short-tailed species have telo/acrocentric macrochromosomes. However, the use of chromosome painting has demonstrated that karyotype evolution in Psittacidae includes a high number of inter/intrachromosomal rearrangements. To determine the phylogeny of long- and short-tailed species, and to propose a putative ancestral karyotype for this group, we constructed homology maps of Pyrrhura frontalis (PFR) and Amazona aestiva (AAE), belonging to the long- and short-tailed groups, respectively. Chromosomes were analyzed by conventional staining and fluorescent in situ hybridization using whole chromosome paints of Gallus gallus and Leucopternis albicollis. Conventional staining showed a karyotype with 2n = 70 in both species, with biarmed macrochromosomes in PFR and telo/acrocentric chromosomes in AAE. Comparison of the results with the putative avian ancestral karyotype (PAK) showed fusions in PFR of PAK1p/PAK4q (PFR1) and PAK6/PAK7 (PFR6) with a paracentric inversion in PFR6. However, in AAE, there was only the fusion between PAK6/7 (AAE7) with a paracentric inversion. Our results indicate that PFR retained a more basal karyotype than long-tailed species previously studied, and AAE a more basal karyotype for Neotropical Psittacidae analyzed so far.

Cross-species chromosome painting in Cetartiodactyla: Reconstructing the karyotype evolution in key phylogenetic lineages

2009 ◽  
Vol 17 (3) ◽  
pp. 419-436 ◽  
Author(s):  
Anastasia I. Kulemzina ◽  
Vladimir A. Trifonov ◽  
Polina L. Perelman ◽  
Nadezhda V. Rubtsova ◽  
Vitaly Volobuev ◽  
...  
Keyword(s):  
Chromosome Painting ◽  
Karyotype Evolution ◽  
Phylogenetic Lineages ◽  
Cross Species Chromosome Painting
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