Pre-organized dinucleosides with pendant porphyrins for the formation of sandwich type complexes with DABCO with high association constants

2015 ◽  
Vol 19 (01-03) ◽  
pp. 535-546 ◽  
Author(s):  
Sonja Merkas ◽  
Souhaila Bouatra ◽  
Régis Rein ◽  
Ivo Piantanida ◽  
Mladen Zinic ◽  
...  

We report herein the synthesis of a dinucleotide bearing pendant porphyrins dedicated to adopt a pre-organized coformation with face-to-face porphyrins, and capable to self-organize in a stable sandwich type complexe with bidentate base such as DABCO. Earlier studies demonstrated that a peptidic linker does not provide sufficient pre-organization to enhance significantly the association constant with bidentate bases such as DABCO on the contrary of some other flexible linkers such as uridine or 2′-deoxyuridine. We document herein that the gain in stability for the formation of sandwich type host–guest complex with DABCO can be even greater when a dinucleotide linker is used. Such pre-organization increases the association constants by one to two orders of magnitude when compared to the association constants of the same bidentate ligands with a reference Zn(II) porphyrin. Comparison of these results with those obtained for rigid tweezers shows a better efficiency of the flexible nucleosidic dimers. We thus document the fact that the choice of rigid spacers is not the only way to pre-organize bis-porphyrins, and that some well-chosen nucleosidic linkers offer an interesting option for the synthesis of such devices. Furthermore, the chirality and enantio-purity of the nucleosidic linkers paves the way toward the selective complexation of enantio-pure bidentate guests and the resolution of racemates.

1997 ◽  
Vol 50 (5) ◽  
pp. 447 ◽  
Author(s):  
Alamdar Ashnagar ◽  
P. Tin Culnane ◽  
Christopher J. Easton ◽  
Jason B. Harper ◽  
Stephen F. Lincoln

At pD 6·80 in D2O containing 0·10 mol dm-3 phosphate buffer, the association constants of the complexes of Naproxen and Ibuprofen with 6A-amino-6A-deoxy-β-cyclodextrin are 810±200 and 8900±2100 mol-1 dm3 , respectively, while those of the corresponding complexes with β-cyclodextrin are 940±170 and 8800±1800 mol-1 dm3 , respectively. A 2D-ROESY experiment shows that Naproxen includes lengthwise in the substituted cyclodextrin, with the reverse orientation to that of the complex with β-cyclodextrin. The orientation in the host{guest complex of the substituted cyclodextrin results in the alignment of the host amino substituent and the guest carboxy group, which at this pD are predominantly protonated and deprotonated, respectively. The similarity in the association constants of the complexes of Naproxen indicates that any stabilization provided by interactions between the ionic groups in the complex of the substituted cyclodextrin is offset by other factors, such as the extent of desolvation of the host and guest.


2017 ◽  
Vol 53 (10) ◽  
pp. 1688-1691 ◽  
Author(s):  
Peifa Wei ◽  
Haoze Wang ◽  
Kecheng Jie ◽  
Feihe Huang

We design a coumarin-containing bis(m-phenylene)-32-crown-10 derivative which efficiently controls the regio- and stereo-selectivity of the photodimerization of its two terminal coumarin groups templated by taco-type host–guest complex formation to selectively produce the syn-head-to-tail cryptand isomer in quantitative yield.


2008 ◽  
Vol 12 (12) ◽  
pp. 1250-1260 ◽  
Author(s):  
Nathalie Solladié ◽  
Farid Aziat ◽  
Souhaila Bouatra ◽  
Régis Rein

We report herein the binding studies of three bis-porphyrinic tweezers bearing nucleosidic linkers and a bis-porphyrinic dipeptide with two bidentate bases of different size, DABCO and 4,4' -bipyridine. In the nucleosidic series, the nucleoside confers, for two dimers out of three, sufficient preorganization to the dimers to enhance the association constants, documenting the fact that rigid dimers are not necessary for preorganization, and opening up new routes to the faster synthesis of flexible tweezers capable of complexing guests with a high association constant. Comparison of these results with those obtained for rigid tweezers shows a better efficiency of the flexible nucleosidic dimers. We thus document the fact that the choice of rigid spacers is not the only way to pre-organize bis-porphyrins, and that some well-chosen nucleosidic linkers offer an interesting option for the synthesis of such devices.


2005 ◽  
Vol 09 (11) ◽  
pp. 779-787 ◽  
Author(s):  
Nathalie Solladié ◽  
Souhaila Bouatra ◽  
Sonja Merkas ◽  
Régis Rein ◽  
Jéröme Roeser

Detailed complexation studies of two rigid tweezers bearing mono- or tris-anthracenic spacers is reported, along with the synthesis and characterization of two new tweezers bearing flexible nucleosidic linkers. For flexible tweezers bearing the two porphyrins at O -5' and O -3' positions of the ribose, the association constant for the complexation of DABCO increases, when compared to the association constant for the same base with a reference mono-porphyrin. The nucleoside seems to confer sufficient preorganization to this dimer to enhance the binding constant, documenting the fact that rigid dimers are not necessary for preorganization, and opening new routes to the rapid synthesis of flexible tweezers capable of complexing guests with high association constants.


2021 ◽  
Vol 154 (15) ◽  
pp. 154105
Author(s):  
Zahra Shadfar ◽  
Oussama Yahiaoui ◽  
Thomas A. Collier ◽  
Thomas Fallon ◽  
Jane R. Allison

2010 ◽  
Vol 83 (8) ◽  
pp. 950-952 ◽  
Author(s):  
Yutaka Hitomi ◽  
Junya Ohyama ◽  
Minori Takegoshi ◽  
Akira Ando ◽  
Takuzo Funabiki ◽  
...  

2011 ◽  
Vol 133 (28) ◽  
pp. 10849-10857 ◽  
Author(s):  
Alberto Gomez-Casado ◽  
Henk H. Dam ◽  
M. Deniz Yilmaz ◽  
Daniel Florea ◽  
Pascal Jonkheijm ◽  
...  

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