scholarly journals Computational prediction of inter-species relationships through omics data analysis and machine learning

2018 ◽  
Vol 19 (S14) ◽  
Author(s):  
Diogo Manuel Carvalho Leite ◽  
Xavier Brochet ◽  
Grégory Resch ◽  
Yok-Ai Que ◽  
Aitana Neves ◽  
...  
2021 ◽  
Vol 49 ◽  
pp. 107739
Author(s):  
Parminder S. Reel ◽  
Smarti Reel ◽  
Ewan Pearson ◽  
Emanuele Trucco ◽  
Emily Jefferson

2019 ◽  
Author(s):  
Yingwei Hu ◽  
Minghui Ao ◽  
Hui Zhang

AbstractThe rapid advancements of high-throughput “omics” technologies have brought huge amount of data to process during and after experiments. Multi-omic analysis facilitates a deeper interrogation of a dataset, and discovery of interesting genes, proteins, lipids, glycans, or metabolites, or pathways related to the corresponding phenotypes in a study. Many individual software tools have been developed to analyze and visualize the data. However, integrating multiple omics data analysis strategies and approaches in a single data processing pipeline is still a challenge task. OmicsOne is a software developed in R, Python and Jupyter Notebook that can achieve statistical analysis, machine learning, and data visualization on multi-‘omics’ data by taking the advantages of integrating the useful tools from individual software packages. OmicsOne can simplify “omics” data analysis, and delineate molecules, or pathways associated to interested phenotypes.


Rhizosphere ◽  
2017 ◽  
Vol 3 ◽  
pp. 222-229 ◽  
Author(s):  
Richard Allen White ◽  
Mark I. Borkum ◽  
Albert Rivas-Ubach ◽  
Aivett Bilbao ◽  
Jason P. Wendler ◽  
...  

2020 ◽  
Vol 71 (1) ◽  
Author(s):  
Sung‐Huan Yu ◽  
Daniela Ferretti ◽  
Julia P. Schessner ◽  
Jan Daniel Rudolph ◽  
Georg H. H. Borner ◽  
...  

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