scholarly journals Empirical Evaluation of the Genetic Similarity of Samples From Twin Registries in Australia and the Netherlands Using 359 STRP Markers

2006 ◽  
Vol 9 (4) ◽  
pp. 600-602 ◽  
Author(s):  
Patrick F. Sullivan ◽  
Grant W. Montgomery ◽  
Jouke Jan Hottenga ◽  
Naomi R. Wray ◽  
Dorret I. Boomsma ◽  
...  

AbstractOne way to achieve the large sample sizes required for genetic studies of complex traits is to combine samples collected by different groups. It is not often clear, however, whether this practice is reasonable from a genetic perspective. To assess the comparability of samples from the Australian and the Netherlands twin studies, we estimated Fst (the proportion of total genetic variability attributable to genetic differences between cohorts) based on 359 short tandem repeat polymorphisms in 1068 individuals. Fst was estimated to be 0.30% between the Australian and the Netherlands cohorts, a smaller value than between many European groups. We conclude that it is reasonable to combine the Australian and the Netherlands samples for joint genetic analyses.

2005 ◽  
Vol 154 (2-3) ◽  
pp. 173-180 ◽  
Author(s):  
Kristina A. Tabbada ◽  
Maria Corazon A. De Ungria ◽  
Liza P. Faustino ◽  
Despina Athanasiadou ◽  
Beate Stradmann-Bellinghausen ◽  
...  

2010 ◽  
Vol 46 (8) ◽  
pp. 988-993 ◽  
Author(s):  
P. Kathiravan ◽  
B. P. Mishra ◽  
R. S. Kataria ◽  
S. Goyal ◽  
K. Tripathy ◽  
...  

2014 ◽  
Author(s):  
Maximilian Press ◽  
Keisha D. Carlson ◽  
Christine Queitsch

Short tandem repeat (STR) variation has been proposed as a major explanatory factor in the heritability of complex traits in humans and model organisms. However, we still struggle to incorporate STR variation into genotype-phenotype maps. Here, we review the promise of STRs in contributing to complex trait heritability, and highlight the challenges that STRs pose due to their repetitive nature. We argue that STR variants are more likely than single nucleotide variants to have epistatic interactions, reiterate the need for targeted assays to accurately genotype STRs, and call for more appropriate statistical methods in detecting STR-phenotype associations. Lastly, somatic STR variation within individuals may serve as a read-out of disease susceptibility, and is thus potentially a valuable covariate for future association studies.


2018 ◽  
Vol 90 (2) ◽  
pp. 151-157 ◽  
Author(s):  
Hironaga Kakoi ◽  
Mio Kikuchi ◽  
Teruaki Tozaki ◽  
Kei‐ichi Hirota ◽  
Shun‐ichi Nagata

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