Die Aminosäuresequenz des Ornithin und Lysin enthaltenden Mureins einiger Stämme von Lactobacillus bifidus aus dem Pansen /The amino acid sequence of the ornithine and lysine containing mureins of some strains of Lactobacillus bifidus isolated from rumen

1969 ◽  
Vol 24 (12) ◽  
pp. 1524-1528 ◽  
Author(s):  
Wilhelm Holzapfel ◽  
Vittoria Scardovi ◽  
Otto Kandler

Cell walls of six strains of Lactobacillus bifidus (recently classified as Bifidobacterium globosum) isolated from the rumen of sheep were isolated by lysing the cells with glass beads followed by tryptic digestion. No teichoic acid could be found. The polysaccharide consists of galactose, rhamnose and glucosamine. The murein (peptidoglycan) contains MurNAc, GlcNH2NAc, Glu, Ala, and diamino acids in a molar ratio of 1:1:1:5:1. Both diamino acids, lysine and ornithine are present. In two strains they occur in about equal amounts, while in the other four strains ornithine is predominant. The lysis of the cell walls by lysozyme resulted in a mixture of two types of muropeptides: One contains lysine, the other ornithine.The amino acid sequence was determined by analysing the oligopeptides arising during acid partial hydrolysis. It was shown, that the tetrapeptides attached to the muramic acid are equal to those of other mureins: L-Ala-γ-D-Glu-L-Lys (L-Orn) -D-Ala. Glutamic acid is probably amidated, since the total hydrolysate contained slightly more than one mole of NH3 per mole of glutamic acid. The cross-liking peptide is a tri-alanine, which is bound to the ω-aminogroup of the diamino acid of one tetrapeptid and to the C-terminal D-alanine of another. Since about 2 —4% of the alanine is N-terminal in the cell wall, 10 to 20% of the interpeptide bridges are probably not cross linked. In addition 2 — 3% of the diamino acids are ω-N-terminal and therefore not substituted by a trialanine. A small percentage of D-alanine and of the diamino acids is C-terminal. The latter indicates, that some of the peptide subunits are incomplete i.e.. the terminal D-alanine is missing.

1970 ◽  
Vol 25 (11) ◽  
pp. 1294-1301 ◽  
Author(s):  
Dieter Koch ◽  
Karl Heinz Schleifer ◽  
Otto Kandler

Cell walls of Bifidobacterium bifidum var. pennsylvanicus were isolated. The polysaccharide consisted of glucose, galactose and rhamnose. Teichoic acid was not present. The murein (peptidoglycan) contained MurNAc, GlcNH2NAc, ᴅ-Glu, Ala. ʟ-Ser, ᴅ-Asp and L-Orn in a ratio of about 1 : 1 : 1 : 2 : 1 : 1 : 1. In one batch a high amount of ʟ-glutamic acid was found. It was not a constituent of the murein since it remained in the lysozyme insensitive residue.The amino acid sequence of the murein was determined by analyzing the oligopeptides arising during partial acid hydrolysis. It was shown that the peptide subunits attached to the muramic acid are the same as in many other mureins: ʟ-Ala-ᴅ-Glu-ʟ-Orn-D-Ala. The interpeptide bridge consisted of β-ᴅ-aspartyl-ʟ-serine. Since about 35% of aspartic acid and 6% of ornithine are N-terminal in the cell wall, it was assumed that only 60% of the peptide subunits are cross-linked. 4 other strains of B. bifidum proved to contain the same type of murein. While all other strains of other species of Bifidobacterium investigated contained other types of murein, it seems likely that the Orn-Ser-Asp type of the murein is typical of B. bifidum.


1962 ◽  
Vol 116 (2) ◽  
pp. 229-245 ◽  
Author(s):  
Stephen I. Morse

The cell walls of an 80/81 strain of Staphylococcus aureus (NYH-6) contain alanine, glycine, glutamic acid, lysine, muramic acid, glucosamine, and ribitol phosphate. 94 per cent of the phosphorus and 41 per cent of the glucosamine are removed by extraction of the cell walls with hot 5 per cent TCA, but significant amounts of the other constituents are not extracted by this procedure. The residue after hot TCA extraction (mucopeptide) is susceptible to lysozyme whereas the intact cell walls are resistant. Staphylococcus aureus cell walls are agglutinated by S. aureus antisera. Agglutination of the cell walls of one S. aureus strain is inhibited by absorption of antisera with cell walls of other S. aureus strains but not by absorption with S. albus cell walls. The ribitol teichoic acid can be isolated from cold TCA extracts of the cell walls. This compound consists almost entirely of ribitol phosphate and glucosamine. The isolated teichoic acid of strain NYH-6 is readily fixed to tanned sheep erythrocytes and these sensitized cells are agglutinated by S. aureus antisera. Cold TCA extracts of cell walls of other strains of S. aureus inhibit hemagglutination whereas extracts of S. albus walls do not. Studies on the inhibition of both hemagglutination and precipitation indicate that the antigenic determinant of S. aureus NYH-6 teichoic acid is ß-N-acetylglucosamine.


1968 ◽  
Vol 23 (2) ◽  
pp. 217-220 ◽  
Author(s):  
I. Miller ◽  
R. Plapp ◽  
O. Kandler

An UDP-activated murein precursor was isolated from Butyribacterium rettgeri after one hour inhibition by D-cycloserine. The compound contains UDP, muramic acid, L-serine, D-glutamic acid and L-ornithine in equimolar amounts. The amino acid sequence of the tripeptide attached to muramic acid is L-Ser-D-Glu-L-Orn as determined by end group analysis and identification of peptides obtained after partial hydrolysis. As shown by the identification of glutamic acid -γ-hydrazid after hydrazinolysis of the compound, ornithine is bound by its α-amino group to the γ-carboxyl group of glutamic acid. The amino acid sequence of the precursor is in agreement with the structure of the corresponding part of the whole murein of Butyribacterium rettgeri, as proposed recently.


1967 ◽  
Vol 22 (10) ◽  
pp. 1062-1067 ◽  
Author(s):  
Roland Plapp ◽  
Otto Kandler

The amino acid sequence of the peptide moiety of the mureins of Lactobacillus coryniformis and Lactobacillus cellobiosus cell walls was determined. This was accomplished by the identification of peptides obtained after partial hydrolysis of purified cell walls and by the identification of UDP-activated murein precursors accumulated by ᴅ-cycloserine inhibition. The amino acid sequence proved to be : ʟ-ala-ᴅ-glu-ʟ-lys-ᴅ-ala for L. coryniformis and L-ala-D-glu-L-orn-D-ala for L. cellobio-.D-asp D-aspsus. Aspartic acid is involved in the cross-linking of the mureins by forming a peptide bond with the C-terminal D-alanine of an adjacent muropeptide. Glutamic acid as well as aspartic acid are present as amides.


1980 ◽  
Vol 45 (4) ◽  
pp. 1144-1154 ◽  
Author(s):  
Miroslav Baudyš ◽  
Helena Keilová ◽  
Vladimír Kostka

To determine the primary structure of the C-terminal part of the molecule of chicken pepsinogen the tryptic, chymotryptic and thermolytic digest of the protein were investigated and peptides derived from this region were sought. These peptides permitted the following 21-residue C-terminal sequence to be determined: ...Ile-Arg-Glu-Tyr-Tyr-Val-Ile-Phe-Asp-Arg-Ala-Asn-Asn-Lys-Val-Gly-Leu-Ser-Pro-Leu-Ser.COOH. A comparison of this structure with the C-terminal sequential regions of the other acid proteases shows a high degree of homology between chicken pepsinogen and these proteases (e.g., the degree of homology with respect to hog pepsinogen and calf prochymosin is about 66%). Additional tryptic peptides, derived from the N-terminal part of the zymogen molecule whose amino acid sequence has been reported before, were also obtained in this study. This sequence was extended by two residues using an overlapping peptide. An ancillary result of this study was the isolation of tryptic peptides derived from other regions of the zymogen molecule.


1987 ◽  
Vol 247 (1) ◽  
pp. 15-21 ◽  
Author(s):  
J Kellermann ◽  
C Thelen ◽  
F Lottspeich ◽  
A Henschen ◽  
R Vogel ◽  
...  

The arrangement of the disulphide bridges in human low-Mr kininogen has been elucidated. Low-Mr kininogen contains 18 half-cystine residues forming nine disulphide bridges. The first and the last half-cystine residues of the amino acid sequence form a disulphide loop which spans the heavy- and the light-chain portion of the kininogen molecule. The other 16 half-cystine residues are linked consecutively to form eight loops of 4-20 amino acids; these loops are lined up in the heavy-chain portion of the kininogen molecule. In this way, a particular pattern of disulphide loops is formed which seems to be of critical importance for the inhibitor function of human kininogen.


1991 ◽  
Vol 88 (8) ◽  
pp. 3116-3119 ◽  
Author(s):  
Y. Sugimoto ◽  
K. Yatsunami ◽  
M. Tsujimoto ◽  
H. G. Khorana ◽  
A. Ichikawa

2020 ◽  
Vol 58 (8) ◽  
pp. 687-694
Author(s):  
Kumarswamy Ummiti ◽  
J V Shanmukha Kumar

Abstract Ganirelix is a synthetic decapeptide linked with nine different amino acids. To understand the peptide amino acid sequence or primary structure, the first step is to determine the amino acid composition of the peptide which can be a determining factor for the peptide immunogenicity. Edman degradation is not a suitable analytical technique to identify amino acid sequence present in Ganirelix due to the absence of uncharged N-terminal amino group. To address this challenge, a pre-column derivatization method was developed with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate reagent. In the present work, the Ganirelix active pharmaceutical ingredient present in the injectable formulation was isolated by fraction collection and further purified by flash chromatography. The amino acid composition of Ganirelix is assayed by carrying out acid hydrolysis with 6 mol L−1 hydrochloric acid solution containing 1% phenol at 100°C for 24 h and derivatization with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate reagent solution, followed by determination of individual amino acids by reverse-phase chromatography using a C18 column. High resolution was achieved for the nine amino acid mixture. The amino acid composition results of temperature-stressed Ganirelix generic product and reference listed drug are in good agreement with the theoretical molar ratio of label information.


1970 ◽  
Vol 25 (7) ◽  
pp. 714-717 ◽  
Author(s):  
E. Interschick ◽  
F. Fiedler ◽  
K. H. Schleifer ◽  
O. Kandler

The amino acid sequence of the murein of A. atrocyaneus was determined. The peptide subunits L-Ala-γ-D-Glu-L-Lys-D-Ala are crosslinked by the interpeptide bridge L-Ala-L-Ala-L-Ser. The α-carboxyl group of D-glutamic acid is substituted by glycine amide which was never found in any other murein so far.


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