scholarly journals Reaction of Br3·2- with 2-Deoxy-D-ribose. A Preferred Attack at C-1

1978 ◽  
Vol 33 (6) ◽  
pp. 666-668 ◽  
Author(s):  
Barry J. Parsons ◽  
Dietrich Schulte-Frohlinde ◽  
Clemens von Sonntag

Abstract In the photolysis of 5-bromouracil containing DNA Br atoms are expected inter mediates. In order to evaluate the possible site of attack of the Br atom at the sugar moiety of DNA the reaction of 2-deoxy-D-ribose with the Br atom (complexed with two bromide ions) was investigated. Hydroxyl radicals generated by the radiolysis of N2O saturated aqueous solutions were converted into Br3·2- radicals by 1 M bromide ions. Br3·2- reacts with 2-deoxy-D-ribose (k = 3.7 · 104M-1s-1, pulse radiolysis). The major product is 2-deoxy-D-erythro-pentonic acid (G = 2.4, γ-radiolysis). It is formed by hydrogen abstraction from C-l and oxidation of this radical by other radicals. An alternative route via the radical at C-2 is neglible. It follows that Br3·2- reacts preferentially at C-1 of 2-deoxy-D-ribose

1976 ◽  
Vol 29 (12) ◽  
pp. 2603 ◽  
Author(s):  
A Davison ◽  
NT Barker ◽  
DF Sangster

Amino acids produced in the γ-radiation-induced carboxylation of pyrrolidine and formate in neutral aqueous solution have been studied. Two products only were found in the ratio 1 : 5.5. The minor product, proline, and the major product, pyrrolidine-3-carboxylic acid, have been characterized. Their presence indicates that the predominant site of hydrogen abstraction from pyrrolidine by radiation-generated hydroxyl radicals is β to the amino group.


1985 ◽  
Vol 40 (3-4) ◽  
pp. 292-294 ◽  
Author(s):  
Suresh Das ◽  
David J. Deeble ◽  
Clemens von Sonntag

Hydrogen atoms from the radiolysis of water at pH 1.6 add to the 5,6-double bond of pyrimidines. The preferen­tial site of attack is the C(5) position (values in brackets) in the case of 6-methyluracil (87%), 1,3-dimethyluracil (71%), uracil (69%) and poly(U) (60%). This reaction yields a radical of reducing properties which can be monitored by its reaction with tetranitromethane in a pulse radiolysis experiment. In thymine (37%), thymidine (32%) and 1,3-dimethylthymine (25%) H-addition no longer pre­ferentially occurs at C(5), but addition is now mainly at C(6). Hydrogen abstraction from the methyl groups or the sugar moiety is negligible (≦ 5.5%). A comparison is made with literature values for the equivalent reactions of OH radicals.


1988 ◽  
Vol 43 (9) ◽  
pp. 1201-1205 ◽  
Author(s):  
Xian-Ming Pan ◽  
Eugenie Bastian ◽  
Clemens von Sonntag

Abstract The reactions of radiolytically generated hydroxyl radicals and H atoms with 1,4- and 1,3-cyclohexadiene were studied by pulse radiolysis and product analysis. Hydrogen abstraction from these substrates by the OH radical yields the cyclohexadienyl radical (ε (310 nm) = 4400 dm3 mol-1 cm-1 from the reaction of the H atom with benzene) with an efficiency of 50% (0.29 ,μmol J-1) in the case of 1,4-cyclohexadiene and 25% (0.15 ,μmol J-1) in the case of 1,3-cyclohexadiene as determined by pulse radiolysis. The remaining OH radicals add to the olefin. In 1.4-cyclohexa- diene the yield of the resulting adduct radicals has been determined in a steady-state 60Co-γ-irradiation experiment by reducing it with added 1.4-dithiothreitol (DTT) to 4-hydroxycyc- lohexene. There are two sites of OH radical attack in the case of 1.3-cyclohexadiene, and only the alkyl radical is reduced quantitatively by DTT (G(3-hydroxycyclohexene) = 0.15 ,μmol J-1). From material balance considerations it is concluded that the allylic radical must be formed with a G value of 0.28 ,μmol J-1 but largelv escapes reduction by DTT (G(4-hvdroxycyclohexene) = 0.03 ,μmol J-1). H atoms add preferentially to the double bonds of 1,4- and 1,3-cyclohexadiene (78% and 93%, respectively), while the O.- radical (the basic form of the OH radical) undergoes mainly H- abstraction (92% and 83%, respectively). The radicals formed in these systems decay bimolecularly (2k = 2.8 x 109 dm3 mol-1 s-1). In their combination reactions the cyclohexadienyl radicals form the four possible dimers in propor­tions such that the dienyl radical moiety shows a 2:1 preference to react from its central (1a) rather than from a terminal carbon atom (1b). Cyclohexadienyl radicals and the OH- and H-adduct radicals also cross-tcrminate by disproportionation and dimerization. Material balance has been obtained for the 1,4-cyclohexadiene system in N2O-Saturated solution (10-2 mol dm-3) at a dose rate of 0.14 Gy s-1, the products (G values in ,μmol J-1) being: benzene (0.085), 4-hydroxycyclohexene (0.25), cyclohexadienyl-dimers (0.144). cvclohexadienyl-OH-adduct- dimers (0.02), OH-adduct-dimers (0.02). Some of the 4-hydroxycyclohcxene is formed in an H-abstraction reaction by the OH-adduct radical from 1,4-cyclohexadiene.


1986 ◽  
Vol 41 (8) ◽  
pp. 1015-1022 ◽  
Author(s):  
Henryk Zegota ◽  
Man Nien Schuchmann ◽  
Dorothea Schulz ◽  
Clemens von Sonntag

Abstract Hydroxyl radicals from the radiolysis of N2O/O2 (4:1)-saturated aqueous solutions of acetone (10−3 mol dm −3) react with the solute by H-abstraction thereby forming acetonyl radicals. As shown by pulse radiolysis, the acetonyl radicals rapidly add oxygen (k = 3 x 109 dm3mol−1s−1) thereby forming acetonylperoxyl radicals which decay by second-order kinetics (2 k = 8 x 108 dm3mol−1s−1). Under steady-state radiolysis conditions (0.24 Gy s−1) the products (G values in parentheses) are methylglyoxal (2.5), hydroxyacetone (0.5), form aldehyde (1 .6), acids (1 .7), carbon dioxide (0 .5), organic (hydro)peroxides (0.4), hydrogen peroxide (2 .2), and G (oxygen uptake) has been determined at 5.2. In the decay of the acetonylperoxyl radicals the major process (slightly less than one half) leads in a concerted reaction to two molecules of methyl­ glyoxal and one molecule of hydrogen peroxide. The Russell mechanism which yields one molecule of methylglyoxal, hydroxyacetone and oxygen contributes about one fifth as does the breakdown into two molecules of form aldehyde, one molecule of oxygen and two acetyl radicals. Carbon dioxide, formaldehyde and acetic acid are among the products which result from the acetylperoxyl radicals formed upon oxygen addition to the acetyl radicals. A bout one tenth of the organic peroxyl radicals is converted into hydroperoxides by O2⨪ produced as a byproduct in the water radiolysis.


2000 ◽  
Vol 26 (4) ◽  
pp. 309-318 ◽  
Author(s):  
G. R. Dey ◽  
D. B. Naik ◽  
P. Dwibedy ◽  
K. Kishore

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