1P094 New replica exchange method, REST(3. Protein folding and misfolding (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Tomoshi Kameda

doi:10.2142/biophys.46.s170_2

1P094 New replica exchange method, REST(3. Protein folding and misfolding (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s170_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S170

Author(s):

Tomoshi Kameda

Keyword(s):

Protein Folding ◽

Poster Session ◽

Replica Exchange ◽

Exchange Method ◽

Meeting Program ◽

Replica Exchange Method

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Replica-exchange method using Tsallis statistics for protein folding

Seibutsu Butsuri ◽

10.2142/biophys.40.s165_2 ◽

2000 ◽

Vol 40 (supplement) ◽

pp. S165

Author(s):

M. Ito ◽

Y. Okamoto

Keyword(s):

Protein Folding ◽

Replica Exchange ◽

Exchange Method ◽

Tsallis Statistics ◽

Replica Exchange Method

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An Analysis on Protein Folding Problem by Replica-Exchange Method

Progress of Theoretical Physics Supplement ◽

10.1143/ptps.138.402 ◽

2000 ◽

Vol 138 ◽

pp. 402-403 ◽

Cited By ~ 7

Author(s):

Yuji Sugita ◽

Yuko Okamoto

Keyword(s):

Protein Folding ◽

Replica Exchange ◽

Exchange Method ◽

Replica Exchange Method

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Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm

Journal of Molecular Graphics and Modelling ◽

10.1016/j.jmgm.2003.12.011 ◽

2004 ◽

Vol 22 (5) ◽

pp. 451-463 ◽

Cited By ~ 52

Author(s):

Ruhong Zhou

Keyword(s):

Free Energy ◽

Protein Folding ◽

Energy Landscape ◽

Replica Exchange ◽

Free Energy Landscape ◽

Exchange Method ◽

Replica Exchange Method ◽

Folding Free Energy

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New force replica exchange method and protein folding pathways probed by force-clamp technique

The Journal of Chemical Physics ◽

10.1063/1.2822272 ◽

2008 ◽

Vol 128 (4) ◽

pp. 045103 ◽

Cited By ~ 29

Author(s):

Maksim Kouza ◽

Chin-Kun Hu ◽

Mai Suan Li

Keyword(s):

Protein Folding ◽

Replica Exchange ◽

Exchange Method ◽

Clamp Technique ◽

Folding Pathways ◽

Force Clamp ◽

Protein Folding Pathways ◽

Replica Exchange Method

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1P125 TFE-induced structures in lysozyme variants lacking some of the disulfide bonds determined by the residue-specific H-D exchange method.(3. Protein folding and misfolding (1),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s178_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S178

Author(s):

Naoki Tokunaga ◽

Yasuo Noda ◽

Hideki Tachibana ◽

Shin-ichi Segawa

Keyword(s):

Protein Folding ◽

Disulfide Bonds ◽

Poster Session ◽

Exchange Method ◽

Meeting Program

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2P096 Molecular characterization of prefoldins from a hyperthermophilic archaeon, Thermococcus sp. strain KS-1(31. Protein folding and misfolding (II),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s319_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S319

Author(s):

Yuri Sugano ◽

Ryo Iizuka ◽

Akashi Ohtaki ◽

Naoki Ide ◽

Takao Yoshida ◽

...

Keyword(s):

Protein Folding ◽

Molecular Characterization ◽

Poster Session ◽

Hyperthermophilic Archaeon ◽

Meeting Program

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1P122 Fragment analysis of the partially unfolded state of equine β-lactoglobulin(3. Protein folding and misfolding (1),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s177_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S177

Author(s):

Kanako Nakagawa ◽

Masamichi Ikeguchi

Keyword(s):

Protein Folding ◽

Poster Session ◽

Fragment Analysis ◽

Meeting Program ◽

Unfolded State ◽

Partially Unfolded ◽

Β Lactoglobulin

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Molecular Dynamics of Apo-Adenylate Kinase: A Distance Replica Exchange Method for the Free Energy of Conformational Fluctuations

The Journal of Physical Chemistry B ◽

10.1021/jp064303c ◽

2006 ◽

Vol 110 (47) ◽

pp. 24121-24137 ◽

Cited By ~ 61

Author(s):

Hongfeng Lou ◽

Robert I. Cukier

Keyword(s):

Molecular Dynamics ◽

Free Energy ◽

Adenylate Kinase ◽

Replica Exchange ◽

Exchange Method ◽

Replica Exchange Method ◽

Kinase A

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Hamiltonian Replica Exchange Method Study of Escherichia coli and Yersinia pestis HPPK

The Journal of Physical Chemistry B ◽

10.1021/jp903861a ◽

2009 ◽

Vol 113 (50) ◽

pp. 16197-16208 ◽

Cited By ~ 5

Author(s):

Li Su ◽

Robert I. Cukier

Keyword(s):

Escherichia Coli ◽

Yersinia Pestis ◽

Replica Exchange ◽

Exchange Method ◽

Hamiltonian Replica Exchange ◽

Replica Exchange Method

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1P124 Stability of helical structure of bee venom melittin(3. Protein folding and misfolding (1),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s177_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S177

Author(s):

Yoshinori Miura ◽

Hirofumi Sakashita

Keyword(s):

Protein Folding ◽

Poster Session ◽

Helical Structure ◽

Bee Venom ◽

Meeting Program

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