A Characterization of Regular Languages as Equality Sets of HDT0L Sequences

2012 ◽  
Vol 116 (1-4) ◽  
pp. 123-128 ◽  
Author(s):  
Juha Honkala
Keyword(s):  
2005 ◽  
Vol 16 (05) ◽  
pp. 1039-1070 ◽  
Author(s):  
LILA KARI ◽  
STAVROS KONSTANTINIDIS ◽  
PETR SOSÍK

The problem of negative design of DNA languages is addressed, that is, properties and construction methods of large sets of words that prevent undesired bonds when used in DNA computations. We recall a few existing formalizations of the problem and then define the property of sim-bond-freedom, where sim is a similarity relation between words. We show that this property is decidable for context-free languages and polynomial-time decidable for regular languages. The maximality of this property also turns out to be decidable for regular languages and polynomial-time decidable for an important case of the Hamming similarity. Then we consider various construction methods for Hamming bond-free languages, including the recently introduced method of templates, and obtain a complete structural characterization of all maximal Hamming bond-free languages. This result is applicable to the θ-k-code property introduced by Jonoska and Mahalingam.


2008 ◽  
Vol 19 (04) ◽  
pp. 859-871 ◽  
Author(s):  
GHEORGHE PĂUN ◽  
MARIO J. PÉREZ-JIMÉNEZ ◽  
TAKASHI YOKOMORI

Insertion-deletion operations are much investigated in linguistics and in DNA computing and several characterizations of Turing computability and characterizations or representations of languages in Chomsky hierarchy were obtained in this framework. In this note we contribute to this research direction with a new characterization of this type, as well as with representations of regular and context-free languages, mainly starting from context-free insertion systems of as small as possible complexity. For instance, each recursively enumerable language L can be represented in a way similar to the celebrated Chomsky-Schützenberger representation of context-free languages, i.e., in the form L = h(L(γ) ∩ D), where γ is an insertion system of weight (3, 0) (at most three symbols are inserted in a context of length zero), h is a projection, and D is a Dyck language. A similar representation can be obtained for regular languages, involving insertion systems of weight (2,0) and star languages, as well as for context-free languages – this time using insertion systems of weight (3, 0) and star languages.


1983 ◽  
Vol 28 (3) ◽  
pp. 315-327 ◽  
Author(s):  
Kojiro Kobayashi ◽  
Masako Takahashi ◽  
Hideki Yamasaki

1982 ◽  
Vol 4 (2) ◽  
pp. 149-152 ◽  
Author(s):  
Karel Culik ◽  
Faith E. Fich ◽  
Arto Salomaa
Keyword(s):  

2013 ◽  
Vol 24 (06) ◽  
pp. 747-763 ◽  
Author(s):  
STEFANO CRESPI REGHIZZI ◽  
PIERLUIGI SAN PIETRO

A recent language definition device named consensual is based on agreement between similar words. Considering a language over a bipartite alphabet made by pairs of unmarked/marked letters, the match relation specifies when such words agree. Thus a set (the “base”) over the bipartite alphabet consensually specifies another language that includes any terminal word such that a set of corresponding matching words is in the base. We show that all and only the regular languages are consensually generated by a strictly locally testable base; the result is based on a generalization of Medvedev's homomorphic characterization of regular languages. Consensually context-free languages strictly include the base family. The consensual and the base families collapse together if the base is context-sensitive.


2017 ◽  
Vol 658 ◽  
pp. 46-59 ◽  
Author(s):  
Marcello M. Bersani ◽  
Matteo Rossi ◽  
Pierluigi San Pietro
Keyword(s):  

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