scholarly journals Expression, Functional Characterization, and Preliminary Crystallization of the Cochaperone Prefoldin from the Thermophilic Fungus Chaetomium thermophilum

2018 ◽  
Vol 19 (8) ◽  
pp. 2452 ◽  
Author(s):  
Kento Morita ◽  
Yohei Yamamoto ◽  
Ayaka Hori ◽  
Tomohiro Obata ◽  
Yuko Uno ◽  
...  

Prefoldin is a hexameric molecular chaperone found in the cytosol of archaea and eukaryotes. Its hexameric complex is built from two related classes of subunits, and has the appearance of a jellyfish: Its body consists of a double β-barrel assembly with six long tentacle-like coiled coils protruding from it. Using the tentacles, prefoldin captures an unfolded protein substrate and transfers it to a group II chaperonin. Based on structural information from archaeal prefoldins, mechanisms of substrate recognition and prefoldin-chaperonin cooperation have been investigated. In contrast, the structure and mechanisms of eukaryotic prefoldins remain unknown. In this study, we succeeded in obtaining recombinant prefoldin from a thermophilic fungus, Chaetomium thermophilum (CtPFD). The recombinant CtPFD could not protect citrate synthase from thermal aggregation. However, CtPFD formed a complex with actin from chicken muscle and tubulin from porcine brain, suggesting substrate specificity. We succeeded in observing the complex formation of CtPFD and the group II chaperonin of C. thermophilum (CtCCT) by atomic force microscopy and electron microscopy. These interaction kinetics were analyzed by surface plasmon resonance using Biacore. Finally, we have shown the transfer of actin from CtPFD to CtCCT. The study of the folding pathway formed by CtPFD and CtCCT should provide important information on mechanisms of the eukaryotic prefoldin–chaperonin system.


2007 ◽  
Vol 143 (4) ◽  
pp. 505-515 ◽  
Author(s):  
H. Hirai ◽  
K. Noi ◽  
K. Hongo ◽  
T. Mizobata ◽  
Y. Kawata


2009 ◽  
Vol 14 (5) ◽  
pp. 551-558
Author(s):  
Jeong-Hwan Kim ◽  
Eun-Jung Shin ◽  
Sung-Jong Jeon ◽  
Yeon-Hee Kim ◽  
Pil Kim ◽  
...  


2009 ◽  
Vol 96 (3) ◽  
pp. 434a
Author(s):  
Tamotsu Zako ◽  
Yosuke Murase ◽  
Ryo Iizuka ◽  
Taro Kanzaki ◽  
Masafumi Shimizu ◽  
...  


1997 ◽  
Vol 236 (3) ◽  
pp. 727-732 ◽  
Author(s):  
Norihiro Nakamura ◽  
Hideki Taguchi ◽  
Noriyuki Ishii ◽  
Masasuke Yoshida ◽  
Makoto Suzuki ◽  
...  


2015 ◽  
Vol 122 ◽  
pp. 212-217 ◽  
Author(s):  
Gülſah ÿzgün ◽  
Nevin Gül Karagüler ◽  
Ossi Turunen ◽  
Nicholas J. Turner ◽  
Barıſ Binay


2004 ◽  
Vol 279 (18) ◽  
pp. 18834-18839 ◽  
Author(s):  
Ryo Iizuka ◽  
Sena So ◽  
Tomonao Inobe ◽  
Takao Yoshida ◽  
Tamotsu Zako ◽  
...  


Author(s):  
German Perlovich ◽  
Artem Surov

In this work, a database containing thermochemical and structural information about 208 monotropic polymorphic forms has been created and analyzed. Most of the identified compounds (77 cases) have been found to have two polymorphs, 14 compounds have three forms and there are only three examples of systems with four polymorphs. The analysis of density distribution within the database has revealed that only 62 out of 114 metastable polymorphs (referred to as group I) obey the `density rule' proposed by Burger and Ramberger [(1979), Mikrochim. Acta, 72, 259–271], while the remaining 45% of the monotropic systems (group II) violate the rule. A number of physicochemical, structural and molecular descriptors have been used to find and highlight the differences between group I and group II of the polymorphs. Group II is characterized (on average) by higher values of descriptors, which are responsible for conformational flexibility of molecules. An algorithm has been proposed for carrying out bivariate statistical analysis. It implies partitioning the database into structurally related clusters based on Tanimoto similarity coefficients and subsequent analysis of each cluster in terms of the number of hydrogen bonds per molecule.



2002 ◽  
Vol 315 (1) ◽  
pp. 73-85 ◽  
Author(s):  
Takao Yoshida ◽  
Rika Kawaguchi ◽  
Hideki Taguchi ◽  
Masasuke Yoshida ◽  
Takuo Yasunaga ◽  
...  


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