NMR Relaxation Matrix Refinement of a DNA Octamer Solution Structure.

Acta Chemica Scandinavica ◽

10.3891/acta.chem.scand.47-0043 ◽

1993 ◽

Vol 47 ◽

pp. 43-56 ◽

Author(s):

Lawrence Shapiro ◽

Michael Nilges ◽

Magdalena Eriksson ◽

Monika Persson ◽

Irena Valterová ◽

...

Keyword(s):

Solution Structure ◽

Nmr Relaxation ◽

Relaxation Matrix ◽

Relaxation Matrix Refinement

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Solution Structure of a DNA Dodecamer Containing the Anti-Neoplastic Agent Arabinosylcytosine: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement

Biochemistry ◽

10.1021/bi00204a008 ◽

1994 ◽

Vol 33 (38) ◽

pp. 11460-11475 ◽

Author(s):

Barry I. Schweitzer ◽

Thomas Mikita ◽

Gregory W. Kellogg ◽

Kevin H. Gardner ◽

G. Peter Beardsley

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Relaxation Matrix ◽

Combined Use ◽

Full Relaxation ◽

Dna Dodecamer ◽

Relaxation Matrix Refinement ◽

Restrained Molecular Dynamics

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The solution structure of motilin from NMR distance constraints, distance geometry, molecular dynamics, and an iterative full relaxation matrix refinement

Biochemistry ◽

10.1021/bi00111a012 ◽

1991 ◽

Vol 30 (47) ◽

pp. 11271-11279 ◽

Author(s):

S. Edmondson ◽

N. Khan ◽

J. Shriver ◽

J. Zdunek ◽

A. Graeslund

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry ◽

Distance Constraints ◽

Relaxation Matrix ◽

Full Relaxation ◽

Relaxation Matrix Refinement

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Relaxation matrix refinement of the solution structure of squash trypsin inhibitor

Journal of Molecular Biology ◽

10.1016/0022-2836(91)90189-d ◽

1991 ◽

Vol 219 (3) ◽

pp. 499-510 ◽

Author(s):

M. Nilges ◽

J. Habazettl ◽

A.T. Brünger ◽

T.A. Holak

Keyword(s):

Trypsin Inhibitor ◽

Solution Structure ◽

Relaxation Matrix ◽

Squash Trypsin Inhibitor ◽

Relaxation Matrix Refinement

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A complete relaxation matrix refinement of the solution structure of a paramagnetic metalloprotein: Reduced HiPIP I fromEctothiorhodospira halophila

Proteins Structure Function and Bioinformatics ◽

10.1002/(sici)1097-0134(199602)24:2<158::aid-prot3>3.0.co;2-f ◽

1996 ◽

Vol 24 (2) ◽

pp. 158-164 ◽

Author(s):

Ivano Bertini ◽

Isabella C. Felli ◽

Claudio Luchinat ◽

Antonio Rosato

Keyword(s):

Solution Structure ◽

Relaxation Matrix ◽

Complete Relaxation ◽

Relaxation Matrix Refinement

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Solution Structure of a DNA Decamer Containing the Antiviral Drug Ganciclovir: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement‡

Biochemistry ◽

10.1021/bi962604e ◽

1997 ◽

Vol 36 (18) ◽

pp. 5336-5345 ◽

Author(s):

Matthew Foti ◽

Stephen Marshalko ◽

Eric Schurter ◽

Surat Kumar ◽

G. Peter Beardsley ◽

...

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Antiviral Drug ◽

Relaxation Matrix ◽

Combined Use ◽

Full Relaxation ◽

Relaxation Matrix Refinement ◽

Restrained Molecular Dynamics

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The solution structure of DNA decamer duplex containing the Dewar product of thymidylyl(3′→5′)thymidine by NMR and full relaxation matrix refinement

FEBS Letters ◽

10.1016/s0014-5793(98)00508-0 ◽

1998 ◽

Vol 428 (3) ◽

pp. 269-274 ◽

Author(s):

Joon-Hwa Lee ◽

Geum-Sook Hwang ◽

Jong-Ki Kim ◽

Byong-Seok Choi

Keyword(s):

Solution Structure ◽

Relaxation Matrix ◽

Full Relaxation ◽

Relaxation Matrix Refinement

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The Solution Structure of DNA Duplex-Decamer Containing the (6-4) Photoproduct of Thymidylyl(3'5')Thymidine by NMR and Relaxation Matrix Refinement

European Journal of Biochemistry ◽

10.1111/j.1432-1033.1995.tb20331.x ◽

1995 ◽

Vol 228 (3) ◽

pp. 849-854 ◽

Author(s):

Jong-Ki Kim ◽

Byong-Seok Choi

Keyword(s):

Solution Structure ◽

Relaxation Matrix ◽

Relaxation Matrix Refinement

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The Solution Structure of a Psoralen Cross-Linked DNA Duplex by NMR and Relaxation Matrix Refinement

Biochemical and Biophysical Research Communications ◽

10.1006/bbrc.1996.0204 ◽

1996 ◽

Vol 219 (1) ◽

pp. 191-197 ◽

Author(s):

Geum-Sook Hwang ◽

Jong-Ki Kim ◽

Byong-Seok Choi

Keyword(s):

Solution Structure ◽

Relaxation Matrix ◽

Relaxation Matrix Refinement

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“Ensemble” iterative relaxation matrix approach: A new NMR refinement protocol applied to the solution structure of crambin

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.340150406 ◽

1993 ◽

Vol 15 (4) ◽

pp. 385-400 ◽

Author(s):

Alexandre M. J. J. Bonvin ◽

J. Antoon C. Rullmann ◽

Rolf M. J. N. Lamerichs ◽

Rolf Boelens ◽

Robert Kaptein

Keyword(s):

Solution Structure ◽

Matrix Approach ◽

Relaxation Matrix

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Solution Structure of a Type 1 H Antigen Trisaccharide at a Micellar Surface: NMR Relaxation and Molecular Dynamics Simulation Studies

The Journal of Physical Chemistry B ◽

10.1021/jp0136462 ◽

2002 ◽

Vol 106 (20) ◽

pp. 5275-5280 ◽

Author(s):

Kristina Lycknert ◽

Torgny Rundlöf ◽

Göran Widmalm

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Solution Structure ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Simulation Studies

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