scholarly journals Open Data, [Open] Access: Linking Data Sharing and Article Sharing in the Earth Sciences

2017 ◽  
Vol 5 (General Issue) ◽  
Author(s):  
Samantha Teplitzky
2021 ◽  
Author(s):  
Olivier Pourret ◽  
Dasapta Irawan

In this short communication, we discuss the latest advances regarding Open Access in the Earth Sciences and geochemistry community from preprints to findable, accessible, interoperable and reusable data following 14f session held at Goldschmidt conference (4-9 July 2021) dedicated to “Open Access in Earth Sciences”.


Publications ◽  
2022 ◽  
Vol 10 (1) ◽  
pp. 3
Author(s):  
Olivier Pourret ◽  
Dasapta Erwin Irawan

In this short communication, we discuss the latest advances regarding Open Access in the earth sciences and geochemistry community from preprints to findable, accessible, interoperable, and reusable data following the 14f session held at Goldschmidt conference (4–9 July 2021) dedicated to “Open Access in Earth Sciences”.


2021 ◽  
pp. 174077452110385
Author(s):  
Enrique Vazquez ◽  
Henri Gouraud ◽  
Florian Naudet ◽  
Cary P Gross ◽  
Harlan M Krumholz ◽  
...  

Background/Aims: Over the past decade, numerous data sharing platforms have been launched, providing access to de-identified individual patient-level data and supporting documentation. We evaluated the characteristics of prominent clinical data sharing platforms, including types of studies listed as available for request, data requests received, and rates of dissemination of research findings from data requests. Methods: We reviewed publicly available information listed on the websites of six prominent clinical data sharing platforms: Biological Specimen and Data Repository Information Coordinating Center, ClinicalStudyDataRequest.com , Project Data Sphere, Supporting Open Access to Researchers–Bristol Myers Squibb, Vivli, and the Yale Open Data Access Project. We recorded key platform characteristics, including listed studies and available supporting documentation, information on the number and status of data requests, and rates of dissemination of research findings from data requests (i.e. publications in a peer-reviewed journals, preprints, conference abstracts, or results reported on the platform’s website). Results: The number of clinical studies listed as available for request varied among five data sharing platforms: Biological Specimen and Data Repository Information Coordinating Center (n = 219), ClinicalStudyDataRequest.com (n = 2,897), Project Data Sphere (n = 154), Vivli (n = 5426), and the Yale Open Data Access Project (n = 395); Supporting Open Access to Researchers did not provide a list of Bristol Myers Squibb studies available for request. Individual patient-level data were nearly always reported as being available for request, as opposed to only Clinical Study Reports (Biological Specimen and Data Repository Information Coordinating Center = 211/219 (96.3%); ClinicalStudyDataRequest.com  = 2884/2897 (99.6%); Project Data Sphere = 154/154 (100.0%); and the Yale Open Data Access Project = 355/395 (89.9%)); Vivli did not provide downloadable study metadata. Of 1201 data requests listed on ClinicalStudyDataRequest.com , Supporting Open Access to Researchers–Bristol Myers Squibb, Vivli, and the Yale Open Data Access Project platforms, 586 requests (48.8%) were approved (i.e. data access granted). The majority were for secondary analyses and/or developing/validating methods ( ClinicalStudyDataRequest.com  = 262/313 (83.7%); Supporting Open Access to Researchers–Bristol Myers Squibb = 22/30 (73.3%); Vivli = 63/84 (75.0%); the Yale Open Data Access Project = 111/159 (69.8%)); four were for re-analyses or corroborations of previous research findings ( ClinicalStudyDataRequest.com  = 3/313 (1.0%) and the Yale Open Data Access Project = 1/159 (0.6%)). Ninety-five (16.1%) approved data requests had results disseminated via peer-reviewed publications ( ClinicalStudyDataRequest.com  = 61/313 (19.5%); Supporting Open Access to Researchers–Bristol Myers Squibb = 3/30 (10.0%); Vivli = 4/84 (4.8%); the Yale Open Data Access Project = 27/159 (17.0%)). Forty-two (6.8%) additional requests reported results through preprints, conference abstracts, or on the platform’s website ( ClinicalStudyDataRequest.com  = 12/313 (3.8%); Supporting Open Access to Researchers–Bristol Myers Squibb = 3/30 (10.0%); Vivli = 2/84 (2.4%); Yale Open Data Access Project = 25/159 (15.7%)). Conclusion: Across six prominent clinical data sharing platforms, information on studies and request metrics varied in availability and format. Most data requests focused on secondary analyses and approximately one-quarter of all approved requests publicly disseminated their results. To further promote the use of shared clinical data, platforms should increase transparency, consistently clarify the availability of the listed studies and supporting documentation, and ensure that research findings from data requests are disseminated.


2018 ◽  
Vol 60 (3) ◽  
pp. 192-198
Author(s):  
Dorota Grygoruk

Abstract The development of information technology makes it possible to collect and analyse more and more data resources. The results of research, regardless of the discipline, constitute one of main sources of data. Currently, the research results are increasingly being published in the Open Access model. The Open Access concept has been accepted and recommended worldwide by many institutions financing and implementing research. Initially, the idea of openness concerned only the results of research and scientific publications; at present, more attention is paid to the problem of sharing scientific data, including raw data. Proceedings towards open data are intricate, as data specificity requires the development of an appropriate legal, technical and organizational model, followed by the implementation of data management policies at both the institutional and national levels. The aim of this publication was to present the development of the open data concept in the context of open access idea and problems related to defining data in the process of data sharing and data management.


2020 ◽  
Author(s):  
Olivier Pourret ◽  
David Hedding ◽  
Dasapta Irawan ◽  
Haiyan Liu ◽  
Jonathan Tennant
Keyword(s):  

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Diego A. Forero ◽  
Walter H. Curioso ◽  
George P. Patrinos

AbstractThere has been an important global interest in Open Science, which include open data and methods, in addition to open access publications. It has been proposed that public availability of raw data increases the value and the possibility of confirmation of scientific findings, in addition to the potential of reducing research waste. Availability of raw data in open repositories facilitates the adequate development of meta-analysis and the cumulative evaluation of evidence for specific topics. In this commentary, we discuss key elements about data sharing in open repositories and we invite researchers around the world to deposit their data in them.


2020 ◽  
Author(s):  
Olivier Pourret ◽  
David Hedding ◽  
Daniel Ibarra ◽  
Dasapta Irawan ◽  
Haiyan Liu ◽  
...  
Keyword(s):  

2021 ◽  
Vol 47 ◽  
Author(s):  
Olivier Pourret ◽  
David William Hedding ◽  
Daniel Enrique Ibarra ◽  
Dasapta Erwin Irawan ◽  
Haiyan Liu ◽  
...  

Background: Open access (OA) implies free and unrestricted access to and re-use of research articles. Recently, OA publishing has seen a new wave of interest, debate, and practices surrounding that mode of publishing. Objectives: To provide an overview of publication practices and to compare them among six countries across the world to stimulate further debate and to raise awareness about OA to facilitate decision-making on further development of OA practices in earth sciences. Methods: The number of OA articles, their distribution among the six countries, and top ten journals publishing OA articles were identified using two databases, namely Scopus and the Web of Science, based mainly on the data for 2018. Results: In 2018, only 24%–31% of the total number of articles indexed by either of the databases were OA articles. Six of the top ten earth sciences journals that publish OA articles were fully OA journals and four were hybrid journals. Fully OA journals were mostly published by emerging publishers and their article processing charges ranged from $1000 to $2200. Conclusions: The rise in OA publishing has potential implications for researchers and tends to shift article-processing charges from organizations to individuals. Until the earth sciences community decides to move away from journal-based criteria to evaluate researchers, it is likely that such high costs will continue to maintain financial inequities within this research community, especially to the disadvantage of researchers from the least developed countries. However, earth scientists, by opting for legal self- archiving of their publications, could help to promote equitable and sustainable access to, and wider dissemination of, their work.


2020 ◽  
Author(s):  
Scott C Edmunds ◽  
Laurie Goodman

Current practices in scientific publishing are unsuitable for rapidly changing fields and for presenting updatable data sets and software tools. In this regard, and as part of the need to push scientific publishing to match the needs of modern research, we would like to announce the upcoming launch of GigaByte, an online open-access, open data journal that aims to be a new way to publish research following the software paradigm: CODE, RELEASE, FORK, UPDATE and REPEAT. Following on the success of GigaScience in promoting data sharing and reproducibility of research, its new sister, GigaByte, will aim to take this even further. With a focus on short articles, using a questionnaire-style review process, and combining that with the custom built publishing infrastructure from River Valley Technologies, we now have a cutting edge, XML-first publishing platform designed specifically to make the entire publication process easier, quicker, more interactive, and better suited to the speed needed to communicate modern research.


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