scholarly journals A Python script to merge Sanger sequences

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11354
Author(s):  
Cen Chen ◽  
Bingguo Lu ◽  
Xiaofang Huang ◽  
Chuyun Bi ◽  
Lili Zhao ◽  
...  
Keyword(s):  

Merging Sanger sequences is frequently needed during the gene cloning process. In this study, we provide a Python script that is able to assemble multiple overlapping Sanger sequences. The script utilizes the overlapping regions within the tandem Sanger sequences to merge the Sanger sequences. The results demonstrate that the script can produce the merged sequence from the input Sanger sequences in a single run. The script offers a simple and free method for merging Sanger sequences and is useful for gene cloning.

2020 ◽  
Author(s):  
Cen Chen ◽  
Xiaofang Huang ◽  
Bingguo Lu ◽  
Chuyun Bi ◽  
Lili Zhao ◽  
...  
Keyword(s):  

Abstract Merging Sanger sequences is frequently needed during the gene cloning process. In this study, we provide a Python script that is able to merge multiple overlapping Sanger sequences. Our results demonstrate that the script can produce the merged sequence from the input Sanger sequences in a single run. The script offers a simple and free method for merging Sanger sequences and is useful for gene cloning.


2010 ◽  
Vol 36 (3) ◽  
pp. 526-532
Author(s):  
Ming-Xia WANG ◽  
Xiang GAO ◽  
Qi-Jiao CHEN ◽  
Jian DONG ◽  
Wan-Chun ZHAO ◽  
...  

2011 ◽  
Vol 34 (8) ◽  
pp. 1156-1164
Author(s):  
Yun-xia QIAN ◽  
Sun-xiao YANG ◽  
Hong LIANG ◽  
Lun QIAN ◽  
Kai-xian QIAN

BJHS Themes ◽  
2020 ◽  
Vol 5 ◽  
pp. 225-243
Author(s):  
Angela N.H. Creager

AbstractLaboratory instructions and recipes are sometimes edited into books with a wide circulation. Even in the late twentieth century, publications of this nature remained influential. For example, protocols from a 1980 summer course on gene cloning at Cold Spring Harbor Laboratory provided the basis for a bestselling laboratory manual by Tom Maniatis, Ed Fritsch and Joe Sambrook. Not only did the Molecular Cloning: A Laboratory Manual become a standard reference for molecular biologists (commonly called the ‘bible’), but also its recipes and clear instructions made gene cloning and recombinant DNA technologies accessible to non-specialists. Consequently, this laboratory manual contributed to the rapid spread of genetic-engineering techniques throughout the life sciences, as well as in industry. As is often the case with how-to books, however, finding a way to update methods in this rapidly changing field posed a challenge, and various molecular-biology reference books had different ways of dealing with knowledge obsolescence. This paper explores the origins of this manual, its publication history, its reception and its rivals – as well as the more recent migration of such laboratory manuals to the Internet.


2002 ◽  
Vol 277 (32) ◽  
pp. 29348
Author(s):  
Masanori Sugiyama ◽  
Kazuhiro Ohtani ◽  
Miho Izuhara ◽  
Tohru Koike ◽  
Koji Suzuki ◽  
...  

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