Molecular and microscopic assessment of the effects of caffeine, acetaminophen, diclofenac, and their mixtures on river biofilm communities

2012 ◽  
Vol 31 (3) ◽  
pp. 508-517 ◽  
Author(s):  
John R. Lawrence ◽  
Bin Zhu ◽  
George D.W. Swerhone ◽  
Julie Roy ◽  
Vijay Tumber ◽  
...  
Keyword(s):  
2011 ◽  
Vol 409 (13) ◽  
pp. 2586-2596 ◽  
Author(s):  
F. Jorand ◽  
A. Zegeye ◽  
J. Ghanbaja ◽  
M. Abdelmoula

2011 ◽  
Vol 77 (15) ◽  
pp. 5394-5401 ◽  
Author(s):  
Emilie Lyautey ◽  
Amandine Cournet ◽  
Soizic Morin ◽  
Stéphanie Boulêtreau ◽  
Luc Etcheverry ◽  
...  

ABSTRACTElectroactivity is a property of microorganisms assembled in biofilms that has been highlighted in a variety of environments. This characteristic was assessed for phototrophic river biofilms at the community scale and at the bacterial population scale. At the community scale, electroactivity was evaluated on stainless steel and copper alloy coupons used both as biofilm colonization supports and as working electrodes. At the population scale, the ability of environmental bacterial strains to catalyze oxygen reduction was assessed by cyclic voltammetry. Our data demonstrate that phototrophic river biofilm development on the electrodes, measured by dry mass and chlorophyllacontent, resulted in significant increases of the recorded potentials, with potentials of up to +120 mV/saturated calomel electrode (SCE) on stainless steel electrodes and +60 mV/SCE on copper electrodes. Thirty-two bacterial strains isolated from natural phototrophic river biofilms were tested by cyclic voltammetry. Twenty-five were able to catalyze oxygen reduction, with shifts of potential ranging from 0.06 to 0.23 V, cathodic peak potentials ranging from −0.36 to −0.76 V/SCE, and peak amplitudes ranging from −9.5 to −19.4 μA. These isolates were diversified phylogenetically (Actinobacteria,Firmicutes,Bacteroidetes, andAlpha-,Beta-, andGammaproteobacteria) and exhibited various phenotypic properties (Gram stain, oxidase, and catalase characteristics). These data suggest that phototrophic river biofilm communities and/or most of their constitutive bacterial populations present the ability to promote electronic exchange with a metallic electrode, supporting the following possibilities: (i) development of electrochemistry-based sensors allowingin situphototrophic river biofilm detection and (ii) production of microbial fuel cell inocula under oligotrophic conditions.


2019 ◽  
Vol 653 ◽  
pp. 148-156 ◽  
Author(s):  
Kailingli Liao ◽  
Yaohui Bai ◽  
Yang Huo ◽  
Zhiyu Jian ◽  
Wanchao Hu ◽  
...  

2017 ◽  
Vol 25 (10) ◽  
pp. 9254-9264 ◽  
Author(s):  
Teofana Chonova ◽  
Jérôme Labanowski ◽  
Benoit Cournoyer ◽  
Cécile Chardon ◽  
François Keck ◽  
...  

2009 ◽  
Vol 45 (1) ◽  
pp. 1-10 ◽  
Author(s):  
Armelle Paule ◽  
Émilie Lyautey ◽  
Frédéric Garabetian ◽  
Jean-Luc Rols
Keyword(s):  

1990 ◽  
Vol 24 (12) ◽  
pp. 1545-1549 ◽  
Author(s):  
Maurice A. Lock ◽  
Tim E. Ford ◽  
Meredith A.J. Hullar ◽  
Molli Kaufman ◽  
J. Robie Vestal ◽  
...  

2004 ◽  
Vol 70 (9) ◽  
pp. 5094-5101 ◽  
Author(s):  
I. H. M. Brümmer ◽  
A. D. M. Felske ◽  
I. Wagner-Döbler

ABSTRACT Cell counts of planctomycetes showed that there were high levels of these organisms in the summer and low levels in the winter in biofilms grown in situ in two polluted rivers, the Elbe River and the Spittelwasser River. In this study 16S rRNA-based methods were used to investigate if these changes were correlated with changes in the species composition. Planctomycete-specific clone libraries of the 16S rRNA genes found in both rivers showed that there were seven clusters, which were distantly related to the genera Pirellula, Planctomyces, and Gemmata. The majority of the sequences from the Spittelwasser River were affiliated with a cluster related to Pirellula, while the majority of the clones from the Elbe River fell into three clusters related to Planctomyces and one deeply branching cluster related to Pirellula. Some clusters also contained sequences derived from freshwater environments worldwide, and the similarities to our biofilm clones were as high as 99.8%, indicating the presence of globally distributed freshwater clusters of planctomycetes that have not been cultivated yet. Community fingerprints of planctomycete 16S rRNA genes were generated by temperature gradient gel electrophoresis from Elbe River biofilm samples collected monthly for 1 year. Sixteen bands were identified, and for the most part these bands represented organisms related to the genus Planctomyces. The fingerprints showed that there was strong seasonality of most bands and that there were clear differences in the summer and the winter. Thus, seasonal changes in the abundance of Planctomycetales in river biofilms were coupled to shifts in the community composition.


2012 ◽  
Vol 4 (3) ◽  
pp. 350-359 ◽  
Author(s):  
Etienne Yergeau ◽  
Sylvie Sanschagrin ◽  
Marley J. Waiser ◽  
John R. Lawrence ◽  
Charles W. Greer

2003 ◽  
Vol 69 (8) ◽  
pp. 4463-4473 ◽  
Author(s):  
I. H. M. Brümmer ◽  
A. Felske ◽  
I. Wagner-Döbler

ABSTRACT The β-subgroup of the Proteobacteria has been shown to be important in aquatic habitats and was investigated in depth here by molecular 16S rRNA techniques in biofilms of the Elbe River and its polluted tributary, the Spittelwasser River. The bacterial 16S rRNA genes were cloned from each site, screened for β-proteobacterial clones and sequenced. River biofilm clones from both rivers grouped into 9 clusters (RBFs). RBFs 1, 2, and 3 fell into the recently described βI cluster of cosmopolitan freshwater bacteria, where they represented new species related to Rhodoferax, Aquaspirillum, and Hydrogenophaga. RBFs 4 to 7 affiliated with Aquabacterium commune, Ideonella dechloratans, and Sphaerotilus natans, respectively. The two remaining RBFs were uncultivated clusters, one of them being distantly related to Gallionella ferruginea. Seasonal changes in the relative intensity of the β-proteobacterial 16S rRNA genes of biofilms harvested monthly for 1 year were determined by specific amplification and separation by temperature gradient gel electrophoresis (TGGE). Bands were identified by comparison of clones to community fingerprints by TGGE. Eight of 13 identified bands were shared by both habitats but showed different relative abundance and seasonal variability in the two rivers, probably caused by differences in temperature and pollutants. The data indicate new not-yet-cultivated clusters of river biofilm organisms, some of them probably distributed globally. They confirm the importance of certain known freshwater genera in river biofilms. The high phylogenetic resolution obtained by clone library analysis combined with the high temporal resolution obtained by TGGE suggest that the observed microdiversity in the river biofilm clone libraries might be caused by phylogenetically closely related microbial populations which are adapted to ecological parameters.


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