Codon Adaptation Index (CAI)

Encyclopedia of Genetics, Genomics, Proteomics and Informatics ◽

10.1007/978-1-4020-6754-9_3267 ◽

2008 ◽

pp. 383-383

Keyword(s):

Codon Adaptation Index ◽

Adaptation Index

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Codon adaptation index as a measure of dominating codon bias

Bioinformatics ◽

10.1093/bioinformatics/btg272 ◽

2003 ◽

Vol 19 (16) ◽

pp. 2005-2015 ◽

Author(s):

A. Carbone ◽

A. Zinovyev ◽

F. Kepes

Keyword(s):

Codon Adaptation Index ◽

Adaptation Index

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The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications

Nucleic Acids Research ◽

10.1093/nar/15.3.1281 ◽

1987 ◽

Vol 15 (3) ◽

pp. 1281-1295 ◽

Cited By ~ 2001

Author(s):

Paul M. Sharp ◽

Wen-Hsiung Li

Keyword(s):

Codon Usage ◽

Codon Usage Bias ◽

Synonymous Codon ◽

Synonymous Codon Usage ◽

Codon Adaptation Index ◽

Potential Applications ◽

Adaptation Index ◽

Synonymous Codon Usage Bias

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A Web Portal to Calculate Codon Adaptation Index (CAI) with Organism Specific Reference Set of High Expression Genes for Diverse Bacteria Species

International Conference on Intelligent Computing and Smart Communication 2019 - Algorithms for Intelligent Systems ◽

10.1007/978-981-15-0633-8_31 ◽

2019 ◽

pp. 319-325

Author(s):

Piyali Sen ◽

Abdul Waris ◽

Suvendra Kumar Ray ◽

Siddhartha Sankar Satapathy

Keyword(s):

High Expression ◽

Codon Adaptation Index ◽

Specific Reference ◽

Reference Set ◽

Adaptation Index

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Relative Codon Adaptation Index, a Sensitive Measure of Codon Usage Bias

Evolutionary Bioinformatics ◽

10.4137/ebo.s4608 ◽

2010 ◽

Vol 6 ◽

pp. EBO.S4608 ◽

Author(s):

Soohyun Lee ◽

Seyeon Weon ◽

Sooncheol Lee ◽

Changwon Kang

Keyword(s):

Codon Usage ◽

Codon Usage Bias ◽

Codon Adaptation Index ◽

Sensitive Measure ◽

Adaptation Index

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Limitations of codon adaptation index and other coding DNA-based features for prediction of protein expression inSaccharomyces cerevisiae

Yeast ◽

10.1002/yea.1150 ◽

2004 ◽

Vol 21 (13) ◽

pp. 1083-1093 ◽

Author(s):

Markus Friberg ◽

Peter von Rohr ◽

Gaston Gonnet

Keyword(s):

Protein Expression ◽

Codon Adaptation Index ◽

Adaptation Index

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Codon Adaptation Index (CAI)

Encyclopedic Dictionary of Genetics, Genomics and Proteomics ◽

10.1002/0471684228.egp02474 ◽

2004 ◽

Keyword(s):

Codon Adaptation Index ◽

Adaptation Index

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E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)

BMC Bioinformatics ◽

10.1186/1471-2105-9-65 ◽

2008 ◽

Vol 9 (1) ◽

pp. 65 ◽

Author(s):

Pere Puigbò ◽

Ignacio G Bravo ◽

Santiago Garcia-Vallvé

Keyword(s):

Expected Value ◽

Codon Adaptation Index ◽

Adaptation Index

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A theoretical analysis of codon adaptation index of the Boophilus microplus bm86 gene directed to the optimization of a DNA vaccine

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2005.08.009 ◽

2006 ◽

Vol 239 (4) ◽

pp. 445-449 ◽

Author(s):

Lina María Ruiz ◽

Gemma Armengol ◽

Edwin Habeych ◽

Sergio Orduz

Keyword(s):

Theoretical Analysis ◽

Dna Vaccine ◽

Boophilus Microplus ◽

Codon Adaptation Index ◽

Adaptation Index

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Expression of Recombinant Human Tropoelastin inSaccharomyces cerevisiae Containing a Synthetic Gene with a High Codon Adaptation Index Coupled to theSUC2 Invertase Signal Sequence

Acta Biotechnologica ◽

10.1002/1521-3846(200105)21:2<189::aid-abio189>3.0.co;2-z ◽

2001 ◽

Vol 21 (2) ◽

pp. 189-193 ◽

Author(s):

P. Toonkool ◽

A.S. Weiss

Keyword(s):

Signal Sequence ◽

Codon Adaptation Index ◽

Synthetic Gene ◽

Adaptation Index

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An Improved Implementation of Codon Adaptation Index

Evolutionary Bioinformatics ◽

10.1177/117693430700300028 ◽

2007 ◽

Vol 3 ◽

pp. 117693430700300 ◽

Author(s):

Xuhua Xia

Keyword(s):

Codon Adaptation Index ◽

Adaptation Index

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