Prediction of protein subcellular localization by support vector machines using multi-scale energy and pseudo amino acid composition

Amino Acid Composition ◽

Acid Composition ◽

Support Vector ◽

Multi Scale ◽

An Ensemble Classifier of Support Vector Machines Used to Predict Protein Structural Classes by Fusing Auto Covariance and Pseudo-Amino Acid Composition

The Protein Journal ◽

10.1007/s10930-009-9222-z ◽

2010 ◽

Vol 29 (1) ◽

pp. 62-67 ◽

Cited By ~ 15

Author(s):

Jiang Wu ◽

Meng-Long Li ◽

Le-Zheng Yu ◽

Chao Wang

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Ensemble Classifier ◽

Support Vector ◽

Vector Machines ◽

Auto Covariance ◽

Structural Classes

Weighted-support vector machines for predicting membrane protein types based on pseudo-amino acid composition

Protein Engineering Design and Selection ◽

10.1093/protein/gzh061 ◽

2004 ◽

Vol 17 (6) ◽

pp. 509-516 ◽

Cited By ~ 138

Author(s):

M. Wang ◽

J. Yang ◽

G.-P. Liu ◽

Z.-J. Xu ◽

K.-C. Chou

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Membrane Protein ◽

Amino Acid Composition ◽

Acid Composition ◽

Support Vector ◽

Pseudo amino acid composition and multi-class support vector machines approach for conotoxin superfamily classification

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2006.06.014 ◽

2006 ◽

Vol 243 (2) ◽

pp. 252-260 ◽

Cited By ~ 91

Author(s):

Sukanta Mondal ◽

Rajasekaran Bhavna ◽

Rajasekaran Mohan Babu ◽

Suryanarayanarao Ramakumar

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Support Vector ◽

Prediction of Apoptosis Protein Locations with Genetic Algorithms and Support Vector Machines Through a New Mode of Pseudo Amino Acid Composition

Protein and Peptide Letters ◽

10.2174/0929866511009011473 ◽

2010 ◽

Vol 17 (12) ◽

pp. 1473-1479 ◽

Cited By ~ 49

Author(s):

Krishna Kumar Kandaswamy ◽

Ganesan Pugalenthi ◽

Steffen Moller ◽

Enno Hartmann ◽

Kai Uwe Kalies ◽

...

Keyword(s):

Genetic Algorithms ◽

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Support Vector ◽

Apoptosis Protein ◽

Using pseudo amino acid composition and binary-tree support vector machines to predict protein structural classes

Amino Acids ◽

10.1007/s00726-007-0496-1 ◽

2007 ◽

Vol 33 (4) ◽

pp. 623-629 ◽

Cited By ~ 81

Author(s):

T.-L. Zhang ◽

Y.-S. Ding

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Binary Tree ◽

Support Vector ◽

Vector Machines ◽

Structural Classes

Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition

BMC Bioinformatics ◽

10.1186/1471-2105-8-466 ◽

2007 ◽

Vol 8 (1) ◽

Cited By ~ 36

Author(s):

Takeyuki Tamura ◽

Tatsuya Akutsu

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Subcellular Location ◽

Support Vector ◽

Location Prediction ◽

Subcellular Location Prediction ◽

Prediction of Rat Protein Subcellular Localization with Pseudo Amino Acid Composition Based on Multiple Sequential Features

Protein and Peptide Letters ◽

10.2174/092986611795222768 ◽

2011 ◽

Vol 18 (6) ◽

pp. 625-633 ◽

Cited By ~ 8

Author(s):

Ruijia Shi ◽

Cunshuan Xu

Keyword(s):

Amino Acid ◽

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition

Predicting Viral Protein Subcellular Localization with Chou's Pseudo Amino Acid Composition and Imbalance-Weighted Multi-Label K-Nearest Neighbor Algorithm

Protein and Peptide Letters ◽

10.2174/092986612803216999 ◽

2012 ◽

Vol 19 (11) ◽

pp. 1163-1169 ◽

Cited By ~ 16

Author(s):

Jun-Zhe Cao ◽

Wen-Qi Liu ◽

Hong Gu

Keyword(s):

Amino Acid ◽

Amino Acid Composition ◽

Acid Composition ◽

Viral Protein ◽

Nearest Neighbor ◽

K Nearest Neighbor ◽

K Nearest Neighbor Algorithm

Identifying the Mesophilic and Thermophilic Proteins from Their Amino Acid Composition with ν-Support Vector Machines

Journal of Algorithms & Computational Technology ◽

10.1260/1748-3018.4.3.335 ◽

2010 ◽

Vol 4 (3) ◽

pp. 335-348

Author(s):

Y. R. Ding ◽

Y. J. Cai ◽

J. Sun ◽

B. W. Xu

Keyword(s):

Amino Acid ◽

Support Vector Machines ◽

Amino Acid Composition ◽

Acid Composition ◽

Support Vector ◽

A novel method for predicting protein subcellular localization based on pseudo amino acid composition

BMB Reports ◽

10.5483/bmbrep.2010.43.10.670 ◽

2010 ◽

Vol 43 (10) ◽

pp. 670-676 ◽

Cited By ~ 12

Author(s):

Junwei Ma ◽

Hong Gu

Keyword(s):

Amino Acid ◽

Amino Acid Composition ◽

Acid Composition ◽

Novel Method