scholarly journals The influence of exocyclic lone pairs on the bonding and geometry of type A mesoionic rings

Author(s):  
Christopher Antony Ramsden ◽  
Wojciech Piotr Oziminski

AbstractBased on structures determined by X-ray crystallography, ab initio MP2 calculations on type A mesoionic rings give geometries in good agreement with observed values. A study of four mesoionic ring systems, each with exocyclic oxygen, nitrogen or carbon groups, shows that the presence and configuration of exocyclic lone pairs significantly influences the geometry and configurational preference. Using a localised bond model and NBO analysis, these effects are rationalised in terms of an anomeric interaction of lone pairs with the antibonding orbitals of adjacent σ bonds. In agreement with experiment, similar effects are calculated for pyran-2-imines.

2021 ◽  
Author(s):  
Christopher Antony Ramsden ◽  
Wojciech Piotr Oziminski

Abstract Based on structures determined by X-ray crystallography, ab initio MP2 calculations on type A mesoionic rings give geometries in good agreement with observed values. A study of four mesoionic ring systems, each with exocyclic oxygen, nitrogen or carbon groups, shows that the presence and configuration of exocyclic lone pairs significantly influences the geometry and configurational preference. Using a localised bond model, these effects are rationalised in terms of an anomeric interaction of lone pairs with the antibonding orbitals of adjacent σ bonds. In agreement with experiment, similar effects are calculated for pyran-2-imines.


1997 ◽  
Vol 52 (11) ◽  
pp. 1418-1431 ◽  
Author(s):  
Roland Weber ◽  
Till Kühn ◽  
Hanspaul Hagenmaier ◽  
Günter Häfelinger

Full ab initio optimizations were performed on the molecular structures of 24 fluorinated and chlorinated dibenzodioxines (PFDD/PCDD ) and dibenzofurans (PFDF/PCDF). Reasonable agreement was found by comparing the geometries of four calculated structures with known X-ray data from the literature. For the fluorine substituent, calculated electron densities (Mulliken total charges and π-electron charges) clearly demonstrate the opposite influence of the inductive (I) and mesomeric (M) effect. The changes in π-densities at carbons in ortho-, meta- and para-position are constant for each fluorine substituent (independent of degree, pattern, and position of substitution). It is thus possible to calculate the π-densities of the substituted dioxines by increments starting from dibenzodioxine. π-Charges from quantum mechanical calculations and the increment system show good agreement even for OctaFDD (O8FDD ), where eight substituent effects are acting additively. Compared with fluorine, the chlorine substituent exercises a smaller -I-effect and a clearly weaker +M-effect. The HOMO coefficients of the unsubstituted dibenzodioxine and dibenzofuran, extracted from ab initio calculations, yield a good explanation for the observed regioselective metabolic attack at the 2,3,7,8-positions. The squares of the HOMO-coefficients of the 2,3,7,8-positions in dibenzodioxine (DD ) are about ten times greater than those of the 1,4,6,9-positions. These HOMO coefficients are practically unaffected by halide substitution. But halogen substitution reduces strongly the electron density at the halogen-bound carbon, which, however, is a necessary prerequisite for the electrophilic oxygen transfer during metabolism. One would therefore expect halogen substitution of dibenzodioxine and dibenzofuran (DF) at the 2,3,7,8-position to hinder metabolism, as is indeed found. This provides a plausible explanation for the highly selective tissue retention of 2,3,7,8-substituted PCDDs and PCDFs. Our ab initio calculations of five tetra CDDs (T4CDDs) confirm the postulate of Kobayashi et al. [1 ] who, using semiempirical calculations, found a correlation between the toxicity of a dioxine congener and its absolute molecular hardness. The 2,3,7,8-T4CDD also exhibits the smallest absolute hardness (derived from the HOMO-LUMO energy gap) in our calculations.


Author(s):  
Anastasia Detsi ◽  
Efstathios Gavrielatos ◽  
Marion-Alexandra Adam ◽  
Olga Igglessi-Markopoulou ◽  
John Markopoulos ◽  
...  

2019 ◽  
Vol 52 (3) ◽  
pp. 564-570 ◽  
Author(s):  
Rolf Hesterberg ◽  
Michel Bonin ◽  
Martin Sommer ◽  
Matthias Burgener ◽  
Bernhard Trusch ◽  
...  

The growth speed of (hkl) faces in the vapour phase, the absolute structure obtained by X-ray crystallography, and the value and the sign of the pyroelectric coefficient of meta-nitroaniline (mNA) were analysed in detail. The in situ observation of morphologically well developed faces of several mNA crystals growing in evacuated ampoules reveals no pronounced growth speed anisotropy for polar faces defining the unique axis 2 of the mm2 group. Scanning pyroelectric microscopy confirms mono-domain mNA crystals. X-ray measurements in the space group Pca21 show that the molecular planes coincide with the {\bar 211} and {\bar 2\bar 1\bar 1} faces, and the nitro groups cover the {201} face in the opposite direction to the crystal tip, characterizing the polar habitus studied here. At room temperature, the sign of the pyroelectric coefficient is positive for a measured effective value of 6.3 µC m−2 K−1, in good agreement with values reported by other authors. From previous elastic and piezoelectric published data, the secondary pyroelectric effect was calculated to be positive and far greater than the effective one, yielding a negative value for the primary pyroelectric coefficient.


Sign in / Sign up

Export Citation Format

Share Document