Karyomorphology and DNA quantification in the marine angiosperm Halophila stipulacea (Forsskål) Ascherson from Mediterranean and Red Seas

2018 ◽  
Vol 148 ◽  
pp. 1-9 ◽  
Author(s):  
G.M. Gargiulo ◽  
I. Vilardo ◽  
G. Cambrea ◽  
F. Gemelli ◽  
A. Crosca
2014 ◽  
Vol 112 ◽  
pp. 98-102 ◽  
Author(s):  
Demian A. Willette ◽  
Julien Chalifour ◽  
A.O. Dolfi Debrot ◽  
M. Sabine Engel ◽  
Jeff Miller ◽  
...  

Lung Cancer ◽  
2005 ◽  
Vol 49 ◽  
pp. S17-S18
Author(s):  
F. Andriani ◽  
D. Conte ◽  
L. Roz ◽  
L. Mariani ◽  
U. Pastorino ◽  
...  

2021 ◽  
Vol 12 (1) ◽  
pp. 150-156
Author(s):  
Soehartati A. Gondhowiardjo ◽  
Handoko ◽  
Marlinda Adham ◽  
Lisnawati Rachmadi ◽  
Henry Kodrat ◽  
...  

Background: Nasopharyngeal cancer is commonly associated with Epstein–Barr virus (EBV) infection, especially undifferentiated non-keratinized histology. EBV DNA quantification through nasopharyngeal brushing was previously reported to be not related to disease stage. This study aimed to reinvestigate the relationship of EBV viral load in tumor tissue with tumor extensiveness by more accurate EBV DNA quantification through microscopically confirmed tumor cells from nasopharyngeal biopsy. Method: The specimens for EBV DNA quantification were derived from histopathology slides which were pre-treated following the QIAsymphony® SP protocol for tissue DNA extraction. Then, the extracted DNA underwent real-time polymerase chain reaction (RT-PCR) using the artus® EBV RG PCR Kit for EBV DNA quantification. The tumor volume was determined by delineating the gross tumor based on 3D imaging of the patient’s nasopharynx. Result: Twenty-four subjects were included in this study. All subjects were stage III and above, with more males (75%) than females. EBV viral load in tumor cells was found to have no correlation to tumor volume both in local and nodal regions. The median local tumor volume was 81.3 cm3 ± 80 cm3. The median EBV viral load in tumor cells was 95,644.8 ± 224,758.4 copies/100 ng of DNA. The median nodal or regional tumor volume was 35.7 ± 73.63 cm3. Conclusion: EBV viral load from tumor cells from nasopharyngeal biopsy has no relationship with tumor extensiveness in nasopharyngeal cancer. The presence and amount of EBV in tumor cells did not translate into larger or smaller tumors. The EBV viral proteins and RNAs were perhaps more likely to confer some prognostic information due to the fact that those molecules were related to carcinogenesis.


2020 ◽  
Vol 63 (6) ◽  
pp. 537-540
Author(s):  
Fee O.H. Smulders ◽  
Kelcie L. Chiquillo ◽  
Demian A. Willette ◽  
Paul H. Barber ◽  
Marjolijn J.A. Christianen

AbstractThe dioecious seagrass species Halophila stipulacea reproduces mainly through fast clonal growth, underlying its invasive behavior. Here, we provide morphological evidence to show that the first findings of fruits in the Caribbean were misidentified. Consequently, H. stipulacea reproduction is likely still only asexual in the Caribbean. Therefore, we introduce an identification key of H. stipulacea reproductive structures to encourage careful identification and quantification throughout its invasive range. Until large-scale seed production in invaded habitats is reported, the apparent low rate of sexual reproduction needs to be considered in current studies investigating the invasion capacity of this species.


1998 ◽  
Vol 64 (4) ◽  
pp. 1490-1496 ◽  
Author(s):  
P. R. Jensen ◽  
K. M. Jenkins ◽  
D. Porter ◽  
W. Fenical

ABSTRACT Significantly fewer thraustochytrid protists (zoosporic fungi) were observed in association with healthy leaf tissue of the marine angiosperm Thalassia testudinum than in association with sterilized samples that were returned to the collection site for 48 h. In support of the hypothesis that sea grass secondary metabolites were responsible for these differences, extracts of healthyT. testudinum leaf tissues inhibited the growth of the co-occurring thraustochytrid Schizochytrium aggregatum and deterred the attachment of S. aggregatum motile zoospores to an extract-impregnated substrate. By using S. aggregatumfor bioassay-guided chemical fractionation, a new flavone glycoside was isolated and structurally characterized as luteolin 7-O-β-d-glucopyranosyl-2"-sulfate. Whole-leaf tissue concentrations of this metabolite (4 mg/ml of wet leaf tissue) inhibited S. aggregatum attachment, and a significantly lower concentration (270 μg/ml) reduced thraustochytrid growth by 50%, suggesting that natural concentrations are at least 15 times greater than that needed for significant microbiological effects. These results offer the first complete chemical characterization of a sea grass sulfated flavone glycoside and provide evidence that a secondary metabolite chemically defends T. testudinum against fouling microorganisms.


2018 ◽  
Vol 54 (80) ◽  
pp. 11260-11263 ◽  
Author(s):  
Roger M. Pallares ◽  
Nguyen T. K. Thanh ◽  
Xiaodi Su

Extracellular DNA (eDNA) is a biomolecule commonly used to characterize microorganism communities in soil and aqueous environments.


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