scholarly journals Maximum entropy prediction of non-equilibrium stationary distributions for stochastic reaction networks with oscillatory dynamics

2017 ◽  
Vol 171 ◽  
pp. 139-148 ◽  
Author(s):  
Pedro H. Constantino ◽  
Yiannis N. Kaznessis
2021 ◽  
Vol 82 (7) ◽  
Author(s):  
Linard Hoessly

AbstractWe examine reaction networks (CRNs) through their associated continuous-time Markov processes. Studying the dynamics of such networks is in general hard, both analytically and by simulation. In particular, stationary distributions of stochastic reaction networks are only known in some cases. We analyze class properties of the underlying continuous-time Markov chain of CRNs under the operation of join and examine conditions such that the form of the stationary distributions of a CRN is derived from the parts of the decomposed CRNs. The conditions can be easily checked in examples and allow recursive application. The theory developed enables sequential decomposition of the Markov processes and calculations of stationary distributions. Since the class of processes expressible through such networks is big and only few assumptions are made, the principle also applies to other stochastic models. We give examples of interest from CRN theory to highlight the decomposition.


PLoS ONE ◽  
2015 ◽  
Vol 10 (7) ◽  
pp. e0130825 ◽  
Author(s):  
Georgios Arampatzis ◽  
Markos A. Katsoulakis ◽  
Yannis Pantazis

2015 ◽  
Vol 142 (3) ◽  
pp. 034118 ◽  
Author(s):  
Benjamin Hepp ◽  
Ankit Gupta ◽  
Mustafa Khammash

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