POPTric: Pathway-based Order Preserving Triclustering for gene sample time data analysis

2021 ◽  
pp. 116336
Author(s):  
Koyel Mandal ◽  
Rosy Sarmah ◽  
Dhruba Kumar Bhattacharyya
Keyword(s):  
2018 ◽  
Vol 19 (S18) ◽  
Author(s):  
Ahmed Sanaullah ◽  
Chen Yang ◽  
Yuri Alexeev ◽  
Kazutomo Yoshii ◽  
Martin C. Herbordt

2019 ◽  
Vol 26 (1) ◽  
pp. 244-252 ◽  
Author(s):  
Shibom Basu ◽  
Jakub W. Kaminski ◽  
Ezequiel Panepucci ◽  
Chia-Ying Huang ◽  
Rangana Warshamanage ◽  
...  

At the Swiss Light Source macromolecular crystallography (MX) beamlines the collection of serial synchrotron crystallography (SSX) diffraction data is facilitated by the recent DA+ data acquisition and analysis software developments. The SSX suite allows easy, efficient and high-throughput measurements on a large number of crystals. The fast continuous diffraction-based two-dimensional grid scan method allows initial location of microcrystals. The CY+ GUI utility enables efficient assessment of a grid scan's analysis output and subsequent collection of multiple wedges of data (so-called minisets) from automatically selected positions in a serial and automated way. The automated data processing (adp) routines adapted to the SSX data collection mode provide near real time analysis for data in both CBF and HDF5 formats. The automatic data merging (adm) is the latest extension of the DA+ data analysis software routines. It utilizes the sxdm (SSX data merging) package, which provides automatic online scaling and merging of minisets and allows identification of a minisets subset resulting in the best quality of the final merged data. The results of both adp and adm are sent to the MX MongoDB database and displayed in the web-based tracker, which provides the user with on-the-fly feedback about the experiment.


2020 ◽  
Vol 17 (11) ◽  
pp. 5162-5166
Author(s):  
Puninder Kaur ◽  
Amandeep Kaur ◽  
Rajwinder Kaur

In the IT world, predicting the academic performance of the huge student population poses a big challenge. Educational data mining techniques significantly contribute in providing solution to this problem. There are several prediction methods available for data classification and clustering, to extract information and provide accurate results. In this paper, different prediction methodologies are highlighted for the prediction of real-time data analysis of dynamic academic behavior of the students. The main focus is to provide brief knowledge about all data mining techniques and highlight dissimilarities among various methods in order to provide the best results for the students.


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