scholarly journals Crystal structure of the N-terminal domain of a glycoside hydrolase family 131 protein from Coprinopsis cinerea

FEBS Letters ◽  
2013 ◽  
Vol 587 (14) ◽  
pp. 2193-2198 ◽  
Author(s):  
Takatsugu Miyazaki ◽  
Makoto Yoshida ◽  
Mizuki Tamura ◽  
Yutaro Tanaka ◽  
Kiwamu Umezawa ◽  
...  
FEBS Journal ◽  
2010 ◽  
Vol 277 (6) ◽  
pp. 1532-1542 ◽  
Author(s):  
Yuan Liu ◽  
Makoto Yoshida ◽  
Yuma Kurakata ◽  
Takatsugu Miyazaki ◽  
Kiyohiko Igarashi ◽  
...  

2015 ◽  
Vol 290 (43) ◽  
pp. 26339-26349 ◽  
Author(s):  
Yuka Okazawa ◽  
Takatsugu Miyazaki ◽  
Gaku Yokoi ◽  
Yuichi Ishizaki ◽  
Atsushi Nishikawa ◽  
...  

Author(s):  
Benjamin Pluvinage ◽  
Craig S. Robb ◽  
Roderick Jeffries ◽  
Alisdair B. Boraston

The recently identified marine bacterium Pseudoalteromonas fuliginea sp. PS47 possesses a polysaccharide-utilization locus dedicated to agarose degradation. In particular, it contains a gene (locus tag EU509_06755) encoding a β-agarase that belongs to glycoside hydrolase family 50 (GH50), PfGH50B. The 2.0 Å resolution X-ray crystal structure of PfGH50B reveals a rare complex multidomain fold that was found in two of the three previously determined GH50 structures. The structure comprises an N-terminal domain with a carbohydrate-binding module (CBM)-like fold fused to a C-terminal domain by a rigid linker. The CBM-like domain appears to function by extending the catalytic groove of the enzyme. Furthermore, the PfGH50B structure highlights key structural features in the mobile loops that may function to restrict the degree of polymerization of the neoagaro-oligosaccharide products and the enzyme processivity.


PLoS ONE ◽  
2020 ◽  
Vol 15 (6) ◽  
pp. e0231513 ◽  
Author(s):  
Keita Saito ◽  
Alexander Holm Viborg ◽  
Shiho Sakamoto ◽  
Takatoshi Arakawa ◽  
Chihaya Yamada ◽  
...  

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