The identification of microRNAs in the whitespotted bamboo shark (Chiloscyllium plagiosum) liver by Illumina sequencing

Gene ◽  
2013 ◽  
Vol 527 (1) ◽  
pp. 259-265 ◽  
Author(s):  
Jie Zhang ◽  
Yunlong Liu ◽  
Xiaofei Zhang ◽  
Jingjing Pan ◽  
Zuoming Nie ◽  
...  
Keyword(s):  
Illumina Sequencing ◽  
Chiloscyllium Plagiosum ◽  
Bamboo Shark

scholarly journals Study of MicroRNAs Related to the Liver Regeneration of the Whitespotted Bamboo Shark,Chiloscyllium plagiosum

2013 ◽  
Vol 2013 ◽  
pp. 1-12 ◽  
Author(s):  
Conger Lu ◽  
Jie Zhang ◽  
Zuoming Nie ◽  
Jian Chen ◽  
Wenping Zhang ◽  
...  
Keyword(s):  
Liver Regeneration ◽  
Marine Biology ◽  
Cellular Proliferation ◽  
Target Prediction ◽  
Regenerating Liver ◽  
Chiloscyllium Plagiosum ◽  
Proliferation And Apoptosis ◽  
Mirna Sequencing ◽  
Bamboo Shark ◽  
Liver Tissues

To understand the mechanisms of liver regeneration better to promote research examining liver diseases and marine biology, normal and regenerative liver tissues ofChiloscyllium plagiosumwere harvested 0 h and 24 h after partial hepatectomy (PH) and used to isolate small RNAs for miRNA sequencing. In total, 91 known miRNAs and 166 putative candidate (PC) miRNAs were identified for the first time inChiloscyllium plagiosum. Through target prediction and GO analysis, 46 of 91 known miRNAs were screened specially for cellular proliferation and growth. Differential expression levels of three miRNAs (xtr-miR-125b, fru-miR-204, and hsa-miR-142-3p_R-1) related to cellular proliferation and apoptosis were measured in normal and regenerating liver tissues at 0 h, 6 h, 12 h, and 24 h using real-time PCR. The expression of these miRNAs showed a rising trend in regenerative liver tissues at 6 h and 12 h but exhibited a downward trend compared to normal levels at 24 h. Differentially expressed genes were screened in normal and regenerating liver tissues at 24 h by DDRT-PCR, and ten sequences were identified. This study provided information regarding the function of genes related to liver regeneration, deepened the understanding of mechanisms of liver regeneration, and resulted in the addition of a significant number of novel miRNAs sequences to GenBank.

Examining an ontogenetic shift in the diet of the whitespotted bamboo shark Chiloscyllium plagiosum in northern Taiwanese waters

2020 ◽  
Vol 35 ◽  
pp. 101234
Author(s):  
Kwang-Ming Liu ◽  
Yu-Han Lin ◽  
Sheng-Kai Chang ◽  
Shoou-Jeng Joung ◽  
Kuan-Yu Su
Keyword(s):  
Ontogenetic Shift ◽  
Chiloscyllium Plagiosum ◽  
Bamboo Shark

Sequence structure character of IgNAR Sec in whitespotted bamboo shark (Chiloscyllium plagiosum)

2020 ◽  
Vol 102 ◽  
pp. 140-144 ◽  
Author(s):  
Wenjie Zhang ◽  
Lanyi Qin ◽  
Xinyi Cai ◽  
Salma Nassor Juma ◽  
Rong Xu ◽  
...  
Keyword(s):  
Sequence Structure ◽  
Chiloscyllium Plagiosum ◽  
Bamboo Shark
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