Microbial oxidation and glucosidation of echinocystic acid by Nocardia corallina

2010 ◽  
Vol 66 (1-2) ◽  
pp. 219-223 ◽  
Author(s):  
Xu Feng ◽  
Zhongmei Zou ◽  
Shaobin Fu ◽  
Lingzhi Sun ◽  
Zhiheng Su ◽  
...  
Forests ◽  
2021 ◽  
Vol 12 (6) ◽  
pp. 732
Author(s):  
Gusti Z. Anshari ◽  
Evi Gusmayanti ◽  
Nisa Novita

Drainage is a major means of the conversion of tropical peat forests into agriculture. Accordingly, drained peat becomes a large source of carbon. However, the amount of carbon (C) loss from drained peats is not simply measured. The current C loss estimate is usually based on a single proxy of the groundwater table, spatially and temporarily dynamic. The relation between groundwater table and C emission is commonly not linear because of the complex natures of heterotrophic carbon emission. Peatland drainage or lowering groundwater table provides plenty of oxygen into the upper layer of peat above the water table, where microbial activity becomes active. Consequently, lowering the water table escalates subsidence that causes physical changes of organic matter (OM) and carbon emission due to microbial oxidation. This paper reviews peat bulk density (BD), total organic carbon (TOC) content, and subsidence rate of tropical peat forest and drained peat. Data of BD, TOC, and subsidence were derived from published and unpublished sources. We found that BD is generally higher in the top surface layer in drained peat than in the undrained peat. TOC values in both drained and undrained are lower in the top and higher in the bottom layer. To estimate carbon emission from the top layer (0–50 cm) in drained peats, we use BD value 0.12 to 0.15 g cm−3, TOC value of 50%, and a 60% conservatively oxidative correction factor. The average peat subsidence is 3.9 cm yr−1. The range of subsidence rate per year is between 2 and 6 cm, which results in estimated emission between 30 and 90 t CO2e ha−1 yr−1. This estimate is comparable to those of other studies and Tier 1 emission factor of the 2013 IPCC GHG Inventory on Wetlands. We argue that subsidence is a practical approach to estimate carbon emission from drained tropical peat is more applicable than the use of groundwater table.


1994 ◽  
Vol 35 (25) ◽  
pp. 4375-4376 ◽  
Author(s):  
Kaoru Nakamura ◽  
Yuko Inoue ◽  
Atsuyoshi Ohno

1980 ◽  
Vol 44 (6) ◽  
pp. 1431-1433
Author(s):  
Hiroshi Torii ◽  
Tsuneo Asano ◽  
Norichika Matsumoto ◽  
Koichi Kato ◽  
Susumu Tsushima ◽  
...  
Keyword(s):  

2011 ◽  
Vol 108 (52) ◽  
pp. E1484-E1490 ◽  
Author(s):  
T. Holler ◽  
G. Wegener ◽  
H. Niemann ◽  
C. Deusner ◽  
T. G. Ferdelman ◽  
...  

1998 ◽  
Vol 44 (7) ◽  
pp. 687-691 ◽  
Author(s):  
Brian Hall ◽  
Jennifer Baldwin ◽  
Ho Gun Rhie ◽  
Douglas Dennis

The polyhydroxyalkanoate (PHA) synthase gene (phaCNc) from Nocardia corallina was identified in a lambda library on a 6-kb BamHI fragment. A 2.8-kb XhoII subfragment was found to contain the ntact PHA synthase. This 2.8-kb fragment was subjected to DNA sequencing and was found to contain the coding region for the PHA synthase and a small downstream open reading frame of unknown function. On the basis of DNA sequence, phaCNc is closest in homology to the PHA synthases (phaCPaI and phaCPaII) of Pseudomonas aeruginosa (approximately 41% identity and 55% similarity). The 2.8-kb XhoII fragment containing phaCNc was subcloned into broad host range mobilizable plasmids and transferred into Escherichia coli, Klebsiella aerogenes (both containing a plasmid bearing phaA and phaB from Ralstonia eutropha), and PHA-negative strains of R. eutropha and Pseudomonas putida. The recombinant strains were grown on various carbon sources and the resulting polymers were analyzed. In these strains, the PHA synthase from N. corallina was able to mediate the production of poly(3-hydroxybutyrate-co-3-hydroxy-hexanoate) containing high levels of 3-hydroxyhexanoate when grown on hexanoate and larger even-chain fatty acids and poly(3-hydroxyvalerate-co-3-hydroxyheptanoate) containing high levels of 3-hydroxyheptanoate when grown on heptanoate or larger odd-chain fatty acids. Key words: polyhydroxyalkanoates (PHAs), Nocardia corallina, biodegradable, polyester.


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