scholarly journals SMS-Builder: An adaptive software tool for building systematic mapping studies

SoftwareX ◽  
2022 ◽  
Vol 17 ◽  
pp. 100935
Author(s):  
Christian A. Candela-Uribe ◽  
Luis E. Sepúlveda-Rodríguez ◽  
Julio C. Chavarro-Porras ◽  
John A. Sanabria-Ordoñez ◽  
José Luis Garrido ◽  
...  
Keyword(s):  
Software Tool ◽  
Adaptive Software ◽  
Systematic Mapping

Unrestrictive protein modification localization and quality control for open search of mass spectra

2018 ◽  
Author(s):  
Zhiwu An ◽  
Fuzhou Gong ◽  
Yan Fu
Keyword(s):  
Mass Spectrometry ◽  
Quality Control ◽  
Tandem Mass Spectrometry ◽  
Mass Spectra ◽  
Protein Modification ◽  
Software Tool ◽  
Tandem Mass ◽  
Simulation Data ◽  
Post Translational Modifications

We have developed PTMiner, a first software tool for automated, confident filtering, localization and annotation of protein post-translational modifications identified by open (mass-tolerant) search of large tandem mass spectrometry datasets. The performance of the software was validated on carefully designed simulation data. <br>

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