Analysis of 23S rRNA genes in metagenomes – A case study from the Global Ocean Sampling Expedition

2011 ◽  
Vol 34 (6) ◽  
pp. 462-469 ◽  
Author(s):  
Pelin Yilmaz ◽  
Renzo Kottmann ◽  
Elmar Pruesse ◽  
Christian Quast ◽  
Frank Oliver Glöckner
2009 ◽  
Vol 49 (4) ◽  
pp. 386-394 ◽  
Author(s):  
Akihiro Tazumi ◽  
Yuki Kakinuma ◽  
John E. Moore ◽  
Cherie B. Millar ◽  
Ikue Taneike ◽  
...  

1982 ◽  
Vol 10 (5) ◽  
pp. 1607-1624 ◽  
Author(s):  
Kate Loughney ◽  
Elsebet Lund ◽  
James E. Dahlberg

2001 ◽  
Vol 183 (14) ◽  
pp. 4382-4385 ◽  
Author(s):  
Steven T. Gregory ◽  
Jamie H. D. Cate ◽  
Albert E. Dahlberg

ABSTRACT Spontaneous, erythromycin-resistant mutants of Thermus thermophilus IB-21 were isolated and found to carry the mutation A2058G in one of two 23S rRNA operons. The heterozygosity of these mutants indicates that A2058G confers a dominant or codominant phenotype in this organism. This mutation provides a valuable tool for the genetic manipulation of the 23S rRNA genes ofThermus.


2006 ◽  
Vol 50 (1) ◽  
pp. 359-361 ◽  
Author(s):  
Nicole Wolter ◽  
Anthony M. Smith ◽  
David J. Farrell ◽  
Keith P. Klugman

ABSTRACT A macrolide-resistant clinical isolate of Streptococcus pneumoniae with 23S rRNA mutations showed a heterogeneous phenotype and genotype. The mutant 23S rRNA genes from this isolate transformed susceptible strain R6 to resistance. Culture of resistant strain R6 in the absence of antibiotic pressure showed gene conversion to occur between the four 23S rRNA alleles, resulting in reversion to susceptibility with the resistant phenotype showing a fitness cost. These data explain the disappearance on subculture of heterogeneous macrolide resistance in the pneumococcus.


2000 ◽  
Vol 14 (10) ◽  
pp. 891-894 ◽  
Author(s):  
Diane E Taylor

Resistance ofHelicobacter pylorito antibiotics ranges from 3% to 10% and may exceed these levels in some countries. The pathophysiology of clarithromycin resistance is reviewed, including the mode of action by which the antibiotic inhibits protein synthesis and the mechanism of resistance, which involves a mutation at position 2142 or 2143 in the V loop domain of the 23S rRNA genes. Mutations of A2142G confer a higher minimum inhibitory concentration than mutations of A2143G. The former demonstrate cross-resistance to macrolide, lincosamide and streptogramin antibiotics, whereas the latter are susceptible to streptogramin B. In vitro mutagenesis combined with natural transformation were used to create several types of clarithromycin-resistant mutants.H pyloristrains with A2142G and A2143G mutations had a higher growth rate than those with A2142C, A2143 or A2142T mutations. Data from this study indicate why clarithromycin-resistant clinical isolates ofH pyloriare more likely to have A2142G or A2143G mutations and only occasionally A2142C mutations.


2016 ◽  
Vol 60 (4) ◽  
pp. 2580-2581 ◽  
Author(s):  
Hiroe Ohno ◽  
Jun-ichi Wachino ◽  
Ryoichi Saito ◽  
Wanchun Jin ◽  
Keiko Yamada ◽  
...  

2008 ◽  
Vol 48 (4) ◽  
pp. 284-292 ◽  
Author(s):  
Akihiro Tazumi ◽  
Tsuyoshi Sekizuka ◽  
John E. Moore ◽  
Cherie B. Millar ◽  
Ikue Taneike ◽  
...  

2012 ◽  
Vol 62 (4) ◽  
pp. 1841-1841
Author(s):  
Takuya Nakajima ◽  
Akihiro Tazumi ◽  
Shigeyuki Nakanishi ◽  
Jiru Xu ◽  
Lei Han ◽  
...  

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