Shotgun Protein Sequencing by Tandem Mass Spectra Assembly

2004 ◽  
Vol 76 (24) ◽  
pp. 7221-7233 ◽  
Author(s):  
Nuno Bandeira ◽  
Haixu Tang ◽  
Vineet Bafna ◽  
Pavel Pevzner
Keyword(s):  
Mass Spectra ◽  
Protein Sequencing ◽  
Tandem Mass ◽  
Tandem Mass Spectra

De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra

2014 ◽  
Vol 13 (7) ◽  
pp. 3241-3248 ◽  
Author(s):  
Xiaowen Liu ◽  
Lennard J. M. Dekker ◽  
Si Wu ◽  
Martijn M. Vanduijn ◽  
Theo M. Luider ◽  
...  
Keyword(s):  
Mass Spectra ◽  
De Novo ◽  
Protein Sequencing ◽  
Tandem Mass ◽  
Top Down ◽  
Bottom Up ◽  
Tandem Mass Spectra

MS_Piano: A Software Tool for Annotating Peaks in CID Tandem Mass Spectra of Peptides and N-Glycopeptides

2021 ◽  
Author(s):  
Xiaoyu Yang ◽  
Pedatsur Neta ◽  
Yuri A. Mirokhin ◽  
Dmitrii V. Tchekhovskoi ◽  
Concepcion A. Remoroza ◽  
...  
Keyword(s):  
Mass Spectra ◽  
Software Tool ◽  
Tandem Mass ◽  
Tandem Mass Spectra

Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags

2010 ◽  
Vol 73 (4) ◽  
pp. 769-777 ◽  
Author(s):  
Loïc Dayon ◽  
Carla Pasquarello ◽  
Christine Hoogland ◽  
Jean-Charles Sanchez ◽  
Alexander Scherl
Keyword(s):  
Mass Spectra ◽  
High Energy ◽  
Tandem Mass ◽  
Peptide Quantification ◽  
Tandem Mass Spectra ◽  
Isobaric Tags

A Novel Scoring Strategy for Identifying Peptide via Tandem Mass Spectra

2009 ◽  
Author(s):  
Changyong Yu ◽  
Guoren Wang ◽  
Wendan Zhai ◽  
Keming Mao
Keyword(s):  
Mass Spectra ◽  
Tandem Mass ◽  
Tandem Mass Spectra

scholarly journals A Computational Framework for Heparan Sulfate Sequencing Using High-resolution Tandem Mass Spectra

2014 ◽  
Vol 13 (9) ◽  
pp. 2490-2502 ◽  
Author(s):  
Han Hu ◽  
Yu Huang ◽  
Yang Mao ◽  
Xiang Yu ◽  
Yongmei Xu ◽  
...  
Keyword(s):  
High Resolution ◽  
Heparan Sulfate ◽  
Mass Spectra ◽  
Tandem Mass ◽  
Computational Framework ◽  
Tandem Mass Spectra

Validation of Endogenous Peptide Identifications Using a Database of Tandem Mass Spectra

2008 ◽  
Vol 7 (7) ◽  
pp. 3049-3053 ◽  
Author(s):  
Maria Fälth ◽  
Marcus Svensson ◽  
Anna Nilsson ◽  
Karl Sköld ◽  
David Fenyö ◽  
...  
Keyword(s):  
Mass Spectra ◽  
Tandem Mass ◽  
Tandem Mass Spectra ◽  
Endogenous Peptide
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