Purification, Characterization, and Three-Dimensional Structure Prediction of Paramyosin, a Novel Allergen of Rapana venosa

2020 ◽  
Vol 68 (49) ◽  
pp. 14632-14642
Author(s):  
Chuang Yu ◽  
Xiang Gao ◽  
Hong Lin ◽  
Lili Xu ◽  
Ishfaq Ahmed ◽  
...  
Keyword(s):  
Structure Prediction ◽  
Three Dimensional ◽  
Dimensional Structure ◽  
Rapana Venosa ◽  
Three Dimensional Structure

scholarly journals RNA-Puzzles: A CASP-like evaluation of RNA three-dimensional structure prediction

RNA ◽  
2012 ◽  
Vol 18 (4) ◽  
pp. 610-625 ◽  
Author(s):  
J. A. Cruz ◽  
M.-F. Blanchet ◽  
M. Boniecki ◽  
J. M. Bujnicki ◽  
S.-J. Chen ◽  
...  
Keyword(s):  
Structure Prediction ◽  
Three Dimensional ◽  
Dimensional Structure ◽  
Three Dimensional Structure

Three-dimensional Structure Prediction of the Human LMTK3 Catalytic Domain in DYG-in Conformation

2017 ◽  
Vol 06 (01) ◽  
Author(s):  
Loubna Allam ◽  
Wiame Lakhlili ◽  
Zineb Tarhda ◽  
Jihane Akachar ◽  
Fatima Ghrifi ◽  
...  
Keyword(s):  
Structure Prediction ◽  
Catalytic Domain ◽  
Three Dimensional ◽  
Dimensional Structure ◽  
Three Dimensional Structure

Cloning, Sequence Analysis and Three-dimensional Structure Prediction of DNA Pol I from Thermophilic Geobacillus sp. MKK Isolated from an Iranian Hot Spring

2007 ◽  
Vol 142 (2) ◽  
pp. 200-208 ◽  
Author(s):  
Mohammad Khalaj-Kondori ◽  
Majid Sadeghizadeh ◽  
Khosro Khajeh ◽  
Hossein Naderi-Manesh ◽  
Ali Mohammad Ahadi ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Structure Prediction ◽  
Hot Spring ◽  
Three Dimensional ◽  
Dimensional Structure ◽  
Three Dimensional Structure ◽  
Pol I

Comparative Genomics and Structure Prediction of Dental Matrix Proteins

2003 ◽  
Vol 17 (1) ◽  
pp. 100-103 ◽  
Author(s):  
R.K. Krishnaraju ◽  
T.C. Hart ◽  
T.K. Schleyer
Keyword(s):  
Comparative Genomics ◽  
Structure Prediction ◽  
Three Dimensional ◽  
Sequence Conservation ◽  
Matrix Proteins ◽  
Dimensional Structure ◽  
Conserved Domains ◽  
Three Dimensional Structure ◽  
Functional Sites ◽  
High Degree

Non-collagenous matrix proteins secreted by the ameloblasts (amelogenin) and odontoblasts (osteocalcin) play important roles in the mineralization of enamel and dentin. In this study, comparative genomics approaches were used to identify the functional domains and model the three-dimensional structure of amelogenin and osteocalcin, respectively. Multiple sequence analysis of amelogenin in different species showed a high degree of sequence conservation at the nucleotide and protein levels. At the protein level, motifs (a sequence pattern that occurs repeatedly in a group of related proteins or genes), conserved domains, secondary structural characteristics, and functional sites of amelogenin from lower phyla were similar to those of the higher-level mammals, reflecting the high degree of sequence conservation during vertebrate evolution. Osteocalcin, produced by both odontoblasts and osetoblasts, also showed sequence similarity between species. Three-dimensional structure predictions developed by modeling of conserved domains of osteocalcin supported a role for glutamic acid residues in the calcium mineralization process.

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