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Identification of A-Minor Tertiary Interactions within a Bacterial Group I Intron Active Site by 3-Deazaadenosine Interference Mapping†
Biochemistry
◽
10.1021/bi020265l
◽
2002
◽
Vol 41
(33)
◽
pp. 10426-10438
◽
Cited By ~ 15
Author(s):
Juliane K. Soukup
◽
Noriaki Minakawa
◽
Akira Matsuda
◽
Scott A. Strobel
Keyword(s):
Active Site
◽
Group I Intron
◽
Bacterial Group
◽
Group I
◽
Interference Mapping
◽
Tertiary Interactions
◽
A Minor
Download Full-text
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Cited By
References
Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site
Natural Structural Biology
◽
10.1038/nsb0198-60
◽
1998
◽
Vol 5
(1)
◽
pp. 60-66
◽
Cited By ~ 63
Author(s):
Scott A. Strobel
◽
Lori Ortoleva-Donnelly
◽
Sean P. Ryder
◽
Jamie H. Cate
◽
Eileen Moncoeur
Keyword(s):
Active Site
◽
Group I Intron
◽
Base Pairs
◽
Group I
◽
Helix Packing
◽
Noncanonical Base Pairs
Download Full-text
A relaxed active site after exon ligation by the group I intron
Proceedings of the National Academy of Sciences
◽
10.1073/pnas.0712016105
◽
2008
◽
Vol 105
(15)
◽
pp. 5699-5704
◽
Cited By ~ 16
Author(s):
S. V. Lipchock
◽
S. A. Strobel
Keyword(s):
Active Site
◽
Group I Intron
◽
Exon Ligation
◽
Group I
Download Full-text
A minor groove RNA triple helix within the catalytic core of a group I intron
Natural Structural Biology
◽
10.1038/4146
◽
1998
◽
Vol 5
(12)
◽
pp. 1037-1042
◽
Cited By ~ 54
Author(s):
Alexander A. Szewczak
◽
Lori Ortoleva-Donnelly
◽
Sean P. Ryder
◽
Eileen Moncoeur
◽
Scott A. Strobel
Keyword(s):
Triple Helix
◽
Group I Intron
◽
Minor Groove
◽
Catalytic Core
◽
Group I
◽
A Minor
◽
Rna Triple Helix
Download Full-text
RNA Tertiary Interactions Mediate Native Collapse of a Bacterial Group I Ribozyme
Journal of Molecular Biology
◽
10.1016/j.jmb.2005.09.015
◽
2005
◽
Vol 353
(5)
◽
pp. 1199-1209
◽
Cited By ~ 43
Author(s):
Seema Chauhan
◽
Gokhan Caliskan
◽
Robert M. Briber
◽
Ursula Perez-Salas
◽
Prashanth Rangan
◽
...
Keyword(s):
Bacterial Group
◽
Group I
◽
Tertiary Interactions
Download Full-text
Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping
Proceedings of the National Academy of Sciences
◽
10.1073/pnas.94.7.2903
◽
1997
◽
Vol 94
(7)
◽
pp. 2903-2908
◽
Cited By ~ 62
Author(s):
S. A. Strobel
◽
K. Shetty
Keyword(s):
Group I Intron
◽
Nucleotide Analog
◽
Group I
◽
Interference Mapping
◽
Chemical Groups
Download Full-text
Faculty Opinions recommendation of Differential helix stabilities and sites pre-organized for tertiary interactions revealed by monitoring local nucleotide flexibility in the bI5 group I intron RNA.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.1019069.216433
◽
2004
◽
Author(s):
Douglas Turner
Keyword(s):
Group I Intron
◽
Group I
◽
Tertiary Interactions
Download Full-text
Faculty Opinions recommendation of Molecular recognition by the Candida albicans group I intron: tertiary interactions with an imino G.A pair facilitate binding of the 5' exon and lower the KM for guanosine.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.1007524.94806
◽
2002
◽
Author(s):
Thorsten Dieckmann
Keyword(s):
Candida Albicans
◽
Molecular Recognition
◽
Group I Intron
◽
Group I
◽
Tertiary Interactions
Download Full-text
Differential Helix Stabilities and Sites Pre-organized for Tertiary Interactions Revealed by Monitoring Local Nucleotide Flexibility in the bI5 Group I Intron RNA†
Biochemistry
◽
10.1021/bi026817h
◽
2003
◽
Vol 42
(4)
◽
pp. 901-909
◽
Cited By ~ 13
Author(s):
Stacy I. Chamberlin
◽
Kevin M. Weeks
Keyword(s):
Group I Intron
◽
Group I
◽
Tertiary Interactions
Download Full-text
Faculty Opinions recommendation of Identification of an active site ligand for a group I ribozyme catalytic metal ion.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.1005324.65956
◽
2002
◽
Author(s):
Niles Lehman
Keyword(s):
Active Site
◽
Metal Ion
◽
Group I
◽
Catalytic Metal
Download Full-text
Faculty Opinions recommendation of Structural evidence for a two-metal-ion mechanism of group I intron splicing.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.1029135.342561
◽
2005
◽
Author(s):
Janet Morrow
Keyword(s):
Metal Ion
◽
Group I Intron
◽
Intron Splicing
◽
Group I
Download Full-text
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