scholarly journals The complete mitochondrial genomes of two sibling species of camellia weevils (Coleoptera: Curculionidae) and patterns of Curculionini speciation

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Shou-ke Zhang ◽  
Jin-ping Shu ◽  
Yang-dong Wang ◽  
Ya-ning Liu ◽  
Han Peng ◽  
...  
Insects ◽  
2019 ◽  
Vol 11 (1) ◽  
pp. 24 ◽  
Author(s):  
Yi Wu ◽  
Yangming Lan ◽  
Liyuan Xia ◽  
Miao Cui ◽  
Weiwei Sun ◽  
...  

Carpophilus dimidiatus (Fabricius, 1792) and Carpophilus pilosellus Motschulsky are two sibling species and economically important storage pests worldwide. The first complete mitochondrial (mt) genomes of both were sequenced using next-generation sequencing. The mt genomes of C. dimidiatus and C. pilosellus are circular, with total lengths of 15,717 bp and 15,686 bp, respectively. Gene order and content for both species are similar to what has been observed in ancestral insects and consist of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a control region. Comparing the mt genome data of C. dimidiatus and C. pilosellus, they are similar in organization, arrangement patterns, GC contents, transfer RNA (tRNA) secondary structures, and codon usage patterns. Small differences were noted with regards to the nucleotide similarity of coding regions and the control region. This is the first publication of the complete mitochondrial genomes of two sibling species. The mt genome sequences can supplement the nuclear markers of the Carpophilus genus in research species identification, system evolution, and population genetic structure, and also will be valuable molecular marker for further genetic studies.


2014 ◽  
Vol 14 (10) ◽  
pp. 1322-1330 ◽  
Author(s):  
C.-P. You ◽  
R.-R. Zhao ◽  
J. Hu ◽  
S.-J. Liu ◽  
M. Tao ◽  
...  

2012 ◽  
Vol 63 (1) ◽  
pp. 64-71 ◽  
Author(s):  
David J. Cerasale ◽  
Roi Dor ◽  
David W. Winkler ◽  
Irby J. Lovette

Genes ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 144
Author(s):  
Ulrike H. Taron ◽  
Johanna L. A. Paijmans ◽  
Axel Barlow ◽  
Michaela Preick ◽  
Arati Iyengar ◽  
...  

The Asiatic wild dog (Cuon alpinus), restricted today largely to South and Southeast Asia, was widespread throughout Eurasia and even reached North America during the Pleistocene. Like many other species, it suffered from a huge range loss towards the end of the Pleistocene and went extinct in most of its former distribution. The fossil record of the dhole is scattered and the identification of fossils can be complicated by an overlap in size and a high morphological similarity between dholes and other canid species. We generated almost complete mitochondrial genomes for six putative dhole fossils from Europe. By using three lines of evidence, i.e., the number of reads mapping to various canid mitochondrial genomes, the evaluation and quantification of the mapping evenness along the reference genomes and phylogenetic analysis, we were able to identify two out of six samples as dhole, whereas four samples represent wolf fossils. This highlights the contribution genetic data can make when trying to identify the species affiliation of fossil specimens. The ancient dhole sequences are highly divergent when compared to modern dhole sequences, but the scarcity of dhole data for comparison impedes a more extensive analysis.


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