scholarly journals Apolipoprotein E structural requirements for the formation of SDS-stable complexes with β-amyloid-(1–40): the role of salt bridges

2002 ◽  
Vol 366 (1) ◽  
pp. 273-279 ◽  
Author(s):  
Nicholas M. BENTLEY ◽  
Mary Jo LaDU ◽  
Chandrika RAJAN ◽  
Godfrey S. GETZ ◽  
Catherine A. REARDON

Of the three major isoforms of human apolipoprotein E (apoE), apoE4 is a risk factor for the development of Alzheimer's disease. Among possible neurologically relevant differences in the properties of apoE3 and apoE4 is the fact that apoE3 forms an SDS-stable complex with β-amyloid-(1–40) (Aβ40) with greater avidity than does apoE4. This interaction may sequester potentially toxic species of Aβ or facilitate clearance. To understand more about this difference, we examined whether differences in salt bridges between apoE domains influence the capacity of apoE isoforms to form complexes with Aβ. In apoE3 there is a salt bridge between Arg-61 and Asp-65, while in apoE4 there are salt bridges between Arg-61 and Glu-255, and Arg-112 and Glu-109. Mutation of position 112, which is Cys in apoE3 and Arg in apoE4, to Ala or Lys abolished complex formation, while mutant apoE with Ser at this position retained the capacity to form complex. Substituting Ala for Glu-109 had no effect on the ability of either apoE4 or apoE3 to form complexes. On the other hand, substitution of Thr for Arg-61 in apoE3 abolished, and truncation of apoE3 at position 201 substantially lowered, but did not abolish, complex formation. Neither of these mutations within apoE4 had any affect on its complex formation with Aβ. These results suggest that the nature of the cysteine residue in apoE3 and interactions between the N-terminal and C-terminal domains of human apoE are important for the ability of apoE3 to form an SDS-stable complex with Aβ40.

2020 ◽  
Author(s):  
Nandan Haloi ◽  
Po-Chao Wen ◽  
Qunlii Cheng ◽  
Meiying Yang ◽  
Gayathri Natarajan ◽  
...  

ABSTRACTComplex formation between hexokinase-II (HKII) and the mitochondrial channel VDAC1 plays a crucial role in regulating cell growth and survival; however, structural details of this complex remain elusive. We hypothesize that a conserved, hydrophobic helix (H-anchor) of HKII first inserts into the outer membrane of mitochondria (OMM) and then interacts with VDAC1 on the cytosolic leaflet of OMM to form a binary complex. To systematically investigate this process, we adopted a hybrid approach: 1) the membrane binding of HKII was first described with molecular dynamics (MD) simulations employing a membrane mimetic model with enhanced lipid diffusion, then 2) the resulting membrane-bound HKII was used to form complex with VDAC1 in millisecond-scale Brownian dynamics (BD) simulations. We show that H-anchor inserts its first 10 residues into the membrane, substantiating previous experimental findings. The insertion depth of the H-anchor was used to derive positional restraints in subsequent BD simulations to preserve the membrane-bound pose of HKII during the formation of the HKII/VDAC1 binary complex. Multiple BD-derived structural models were further refined with MD simulations, resulting in one stable complex. A major feature in the complex is the partial (not complete) blockade of VDAC1’s permeation pathway by HKII, a result supported by our comparative electrophysiological measurements of the channel in the presence and absence of HKII. Additionally, we showed how VDAC1 phosphorylation disrupts HKII binding, a feature that is verified by our electrophysiology recordings and have implications in mitochondria-mediated cell death.


Biochemistry ◽  
2000 ◽  
Vol 39 (51) ◽  
pp. 16119-16124 ◽  
Author(s):  
Gregory W. Munson ◽  
Alex E. Roher ◽  
Yu-Min Kuo ◽  
Sean M. Gilligan ◽  
Catherine A. Reardon ◽  
...  

1999 ◽  
Vol 72 (1) ◽  
pp. 230-237 ◽  
Author(s):  
Thierry Pillot ◽  
Marc Goethals ◽  
Jamilla Najib ◽  
Christine Labeur ◽  
Laurence Lins ◽  
...  

1990 ◽  
Vol 265 (16) ◽  
pp. 9496-9504 ◽  
Author(s):  
D J Chang ◽  
Y K Paik ◽  
T P Leren ◽  
D W Walker ◽  
G J Howlett ◽  
...  

1982 ◽  
Vol 23 (8) ◽  
pp. 1174-1182 ◽  
Author(s):  
M R Wardell ◽  
P A Suckling ◽  
E D Janus

1994 ◽  
Vol 200 (1) ◽  
pp. 298-305 ◽  
Author(s):  
V.M. Fazio ◽  
S. Fazio ◽  
M. Rinaldi ◽  
M.V. Catani ◽  
S. Zotti ◽  
...  

1985 ◽  
Vol 260 (30) ◽  
pp. 16375-16382 ◽  
Author(s):  
S Yokoyama ◽  
Y Kawai ◽  
S Tajima ◽  
A Yamamoto

1998 ◽  
Vol 39 (7) ◽  
pp. 1372-1381 ◽  
Author(s):  
Catherine A. Reardon ◽  
Lydia Blachowicz ◽  
Krista M. Watson ◽  
Eliav Barr ◽  
Godfrey S. Getz

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