A guiding potential method for evaluating the bending rigidity of tensionless lipid membranes from molecular simulation

2013 ◽  
Vol 139 (3) ◽  
pp. 034108 ◽  
Author(s):  
Shuhei Kawamoto ◽  
Takenobu Nakamura ◽  
Steven O. Nielsen ◽  
Wataru Shinoda
2016 ◽  
Vol 52 (12) ◽  
pp. 1172-1178 ◽  
Author(s):  
Denitsa Mitkova ◽  
Victoria Vitkova

Soft Matter ◽  
2009 ◽  
Vol 5 (22) ◽  
pp. 4433 ◽  
Author(s):  
Luca Monticelli ◽  
Emppu Salonen ◽  
Pu Chun Ke ◽  
Ilpo Vattulainen

2017 ◽  
Vol 19 (25) ◽  
pp. 16806-16818 ◽  
Author(s):  
M. Doktorova ◽  
D. Harries ◽  
G. Khelashvili

Computational methodology that allows to extract bending rigidity and tilt modulus for a wide range of single and multi-component lipid bilayers from real-space analysis of fluctuations in molecular dynamics simulations.


2006 ◽  
Vol 91 (6) ◽  
pp. 2046-2054 ◽  
Author(s):  
Kristen E. Norman ◽  
Hugh Nymeyer

MEMBRANE ◽  
2011 ◽  
Vol 36 (1) ◽  
pp. 31-37 ◽  
Author(s):  
Wataru Shinoda

2020 ◽  
Vol 117 (36) ◽  
pp. 21896-21905 ◽  
Author(s):  
Saptarshi Chakraborty ◽  
Milka Doktorova ◽  
Trivikram R. Molugu ◽  
Frederick A. Heberle ◽  
Haden L. Scott ◽  
...  

Cholesterol is an integral component of eukaryotic cell membranes and a key molecule in controlling membrane fluidity, organization, and other physicochemical parameters. It also plays a regulatory function in antibiotic drug resistance and the immune response of cells against viruses, by stabilizing the membrane against structural damage. While it is well understood that, structurally, cholesterol exhibits a densification effect on fluid lipid membranes, its effects on membrane bending rigidity are assumed to be nonuniversal; i.e., cholesterol stiffens saturated lipid membranes, but has no stiffening effect on membranes populated by unsaturated lipids, such as 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC). This observation presents a clear challenge to structure–property relationships and to our understanding of cholesterol-mediated biological functions. Here, using a comprehensive approach—combining neutron spin-echo (NSE) spectroscopy, solid-state deuterium NMR (2H NMR) spectroscopy, and molecular dynamics (MD) simulations—we report that cholesterol locally increases the bending rigidity of DOPC membranes, similar to saturated membranes, by increasing the bilayer’s packing density. All three techniques, inherently sensitive to mesoscale bending fluctuations, show up to a threefold increase in effective bending rigidity with increasing cholesterol content approaching a mole fraction of 50%. Our observations are in good agreement with the known effects of cholesterol on the area-compressibility modulus and membrane structure, reaffirming membrane structure–property relationships. The current findings point to a scale-dependent manifestation of membrane properties, highlighting the need to reassess cholesterol’s role in controlling membrane bending rigidity over mesoscopic length and time scales of important biological functions, such as viral budding and lipid–protein interactions.


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