scholarly journals Explicit ions/implicit water generalized Born model for nucleic acids

2018 ◽  
Vol 148 (19) ◽  
pp. 195101 ◽  
Author(s):  
Igor S. Tolokh ◽  
Dennis G. Thomas ◽  
Alexey V. Onufriev
Keyword(s):  
Nucleic Acids ◽  
Generalized Born ◽  
Born Model ◽  
Generalized Born Model

Application of a pairwise generalized Born model to proteins and nucleic acids: inclusion of salt effects

1999 ◽  
Vol 101 (6) ◽  
pp. 426-434 ◽  
Author(s):  
Jayashree Srinivasan ◽  
Megan W. Trevathan ◽  
Paul Beroza ◽  
David A. Case
Keyword(s):  
Nucleic Acids ◽  
Salt Effects ◽  
Generalized Born ◽  
Born Model ◽  
Generalized Born Model

Free Energies of Hydration from a Generalized Born Model and an All-Atom Force Field

2004 ◽  
Vol 108 (41) ◽  
pp. 16264-16270 ◽  
Author(s):  
William L. Jorgensen ◽  
Jakob P. Ulmschneider ◽  
Julian Tirado-Rives
Keyword(s):  
Force Field ◽  
Free Energies ◽  
Generalized Born ◽  
Born Model ◽  
Generalized Born Model

scholarly journals Modification of the Generalized Born Model Suitable for Macromolecules

2000 ◽  
Vol 104 (15) ◽  
pp. 3712-3720 ◽  
Author(s):  
Alexey Onufriev ◽  
Donald Bashford ◽  
David A. Case
Keyword(s):  
Generalized Born ◽  
Born Model ◽  
Generalized Born Model
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