Identification of functionally key residues in maltose transporter with an elastic network model-based thermodynamic method

2016 ◽  
Vol 114 (22) ◽  
pp. 3407-3417
Author(s):  
Dashuai Lv ◽  
Chunhua Li ◽  
Jianjun Tan ◽  
Xiaoyi Zhang ◽  
Cunxin Wang ◽  
...  
Keyword(s):  
Network Model ◽  
Thermodynamic Method ◽  
Elastic Network Model ◽  
Elastic Network ◽  
Model Based ◽  
Maltose Transporter ◽  
Key Residues

Prediction of allosteric sites on protein surfaces with an elastic-network-model-based thermodynamic method

2014 ◽  
Vol 90 (2) ◽  
Author(s):  
Ji Guo Su ◽  
Li Sheng Qi ◽  
Chun Hua Li ◽  
Yan Ying Zhu ◽  
Hui Jing Du ◽  
...  
Keyword(s):  
Network Model ◽  
Thermodynamic Method ◽  
Elastic Network Model ◽  
Protein Surfaces ◽  
Elastic Network ◽  
Model Based ◽  
Allosteric Sites

Higher Accuracy Achieved for Protein–Ligand Binding Pose Prediction by Elastic Network Model-Based Ensemble Docking

2020 ◽  
Vol 60 (6) ◽  
pp. 2939-2950 ◽  
Author(s):  
Anhui Wang ◽  
Yuebin Zhang ◽  
Huiying Chu ◽  
Chenyi Liao ◽  
Zhichao Zhang ◽  
...  
Keyword(s):  
Ligand Binding ◽  
Network Model ◽  
Pose Prediction ◽  
Elastic Network Model ◽  
Elastic Network ◽  
Ensemble Docking ◽  
Model Based

Allosteric transitions of the maltose transporter studied by an elastic network model

Biopolymers ◽  
2014 ◽  
Vol 101 (7) ◽  
pp. 758-768 ◽  
Author(s):  
Chun Hua Li ◽  
Yong Xiao Yang ◽  
Ji Guo Su ◽  
Bin Liu ◽  
Jian Jun Tan ◽  
...  
Keyword(s):  
Network Model ◽  
Elastic Network Model ◽  
Elastic Network ◽  
Maltose Transporter ◽  
Allosteric Transitions
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