Robust unmixing of tumor states in array comparative genomic hybridization data

Bioinformatics ◽

10.1093/bioinformatics/btq213 ◽

2010 ◽

Vol 26 (12) ◽

pp. i106-i114 ◽

Author(s):

David Tolliver ◽

Charalampos Tsourakakis ◽

Ayshwarya Subramanian ◽

Stanley Shackney ◽

Russell Schwartz

Keyword(s):

Comparative Genomic Hybridization ◽

Array Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data

Download Full-text

A Bayesian Analysis of Copy Number Variations in Array Comparative Genomic Hybridization Data

International Journal of Biomedical Data Mining ◽

10.4172/2090-4924.1000116 ◽

2015 ◽

Vol 04 (01) ◽

Author(s):

Xiaowei Wu ◽

Hongxiao Zhu

Keyword(s):

Bayesian Analysis ◽

Comparative Genomic Hybridization ◽

Copy Number ◽

Array Comparative Genomic Hybridization ◽

Copy Number Variations ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data

Download Full-text

Breakpoint identification and smoothing of array comparative genomic hybridization data

Bioinformatics ◽

10.1093/bioinformatics/bth355 ◽

2004 ◽

Vol 20 (18) ◽

pp. 3636-3637 ◽

Author(s):

K. Jong ◽

E. Marchiori ◽

G. Meijer ◽

A. v. d. Vaart ◽

B. Ylstra

Keyword(s):

Comparative Genomic Hybridization ◽

Array Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data

Download Full-text

CGHMultiArray: exact P-values for multi-array comparative genomic hybridization data

Bioinformatics ◽

10.1093/bioinformatics/bti489 ◽

2005 ◽

Vol 21 (14) ◽

pp. 3193-3194 ◽

Author(s):

M. A. van de Wiel ◽

S. J. Smeets ◽

R. H. Brakenhoff ◽

B. Ylstra

Keyword(s):

Comparative Genomic Hybridization ◽

Array Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

P Values ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data

Download Full-text

GeneCount: genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data

Genome Biology ◽

10.1186/gb-2008-9-5-r86 ◽

2008 ◽

Vol 9 (5) ◽

pp. R86 ◽

Author(s):

Heidi Lyng ◽

Malin Lando ◽

Runar S Brøvig ◽

Debbie H Svendsrud ◽

Morten Johansen ◽

...

Keyword(s):

Comparative Genomic Hybridization ◽

Array Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data ◽

Copy Numbers ◽

Genome Wide ◽

Dna Copy Numbers ◽

Download Full-text

A Modified Bayes Information Criterion with Applications to the Analysis of Comparative Genomic Hybridization Data

10.1111/j.1541-0420.2006.00662.x ◽

2006 ◽

Vol 63 (1) ◽

pp. 22-32 ◽

Author(s):

Nancy R. Zhang ◽

David O. Siegmund

Keyword(s):

Comparative Genomic Hybridization ◽

Information Criterion ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data ◽

Bayes Information Criterion

Download Full-text

−8p12–23 and +20q Are Predictors of Subtypes and Metastatic Pathways in Colorectal Cancer: Construction of Tree Models Using Comparative Genomic Hybridization Data

OMICS A Journal of Integrative Biology ◽

10.1089/omi.2010.0101 ◽

2011 ◽

Vol 15 (1-2) ◽

pp. 37-47 ◽

Author(s):

Xiaobo Li ◽

Jian Chen ◽

Bingjian Lü ◽

Sihua Peng ◽

Richard Desper ◽

...

Keyword(s):

Colorectal Cancer ◽

Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data ◽

Download Full-text

Construction of evolutionary tree models for nasopharyngeal carcinoma using comparative genomic hybridization data

Cancer Genetics and Cytogenetics ◽

10.1016/j.cancergencyto.2006.02.017 ◽

2006 ◽

Vol 168 (2) ◽

pp. 105-108 ◽

Author(s):

Lawrence Shih-Hsin Wu

Keyword(s):

Nasopharyngeal Carcinoma ◽

Comparative Genomic Hybridization ◽

Evolutionary Tree ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data ◽

Download Full-text

Stochastic segmentation models for array-based comparative genomic hybridization data analysis

Biostatistics ◽

10.1093/biostatistics/kxm031 ◽

2007 ◽

Vol 9 (2) ◽

pp. 290-307 ◽

Author(s):

T. L. Lai ◽

H. Xing ◽

N. Zhang

Keyword(s):

Data Analysis ◽

Comparative Genomic Hybridization ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data ◽

Stochastic Segmentation ◽

Segmentation Models

Download Full-text

Detection of Copy Number Variations from Array Comparative Genomic Hybridization Data Using Linear-chain Conditional Random Field Models

Probabilistic Graphical Models for Genetics, Genomics, and Postgenomics ◽

10.1093/acprof:oso/9780198709022.003.0016 ◽

2014 ◽

pp. 409-428

Author(s):

Xiaolin Yin ◽

Jing Li

Keyword(s):

Random Field ◽

Comparative Genomic Hybridization ◽

Copy Number ◽

Array Comparative Genomic Hybridization ◽

Conditional Random Field ◽

Linear Chain ◽

Copy Number Variations ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Hybridization Data

Download Full-text

Analysis of Comparative Genomic Hybridization Data on cDNA Microarrays

Microarray Data Analysis - Methods in Molecular Biology™ ◽

10.1007/978-1-59745-390-5_11 ◽

2007 ◽

pp. 175-186

Author(s):

Sven Bilke ◽

Javed Khan

Keyword(s):

Comparative Genomic Hybridization ◽

Cdna Microarrays ◽

Comparative Genomic ◽

Genomic Hybridization ◽

Comparative Genomic Hybridization Data ◽

Hybridization Data

Download Full-text