RAGA: RNA sequence alignment by genetic algorithm

Nucleic Acids Research ◽

10.1093/nar/25.22.4570 ◽

1997 ◽

Vol 25 (22) ◽

pp. 4570-4580 ◽

Author(s):

C Notredame

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

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A hybrid genetic algorithm with chemical reaction optimization for multiple sequence alignment.

2019 22nd International Conference on Computer and Information Technology (ICCIT) ◽

10.1109/iccit48885.2019.9038510 ◽

2019 ◽

Author(s):

Sajib Chatterjee ◽

Promal barua ◽

M. M. Hasibuzzaman ◽

Afrin Iftiea ◽

Tarpan Mukharjee ◽

...

Keyword(s):

Genetic Algorithm ◽

Chemical Reaction ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Hybrid Genetic Algorithm ◽

Chemical Reaction Optimization ◽

Multiple Sequence ◽

Reaction Optimization

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Novel use of a genetic algorithm for protein structure prediction: Searching template and sequence alignment space

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.10549 ◽

2003 ◽

Vol 53 (S6) ◽

pp. 424-429 ◽

Author(s):

Bruno Contreras-Moreira ◽

Paul W. Fitzjohn ◽

Marc Offman ◽

Graham R. Smith ◽

Paul A. Bates

Keyword(s):

Genetic Algorithm ◽

Protein Structure ◽

Protein Structure Prediction ◽

Sequence Alignment ◽

Structure Prediction

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A Web Server for Multi-objective Pairwise RNA Sequence Alignment with an Index for Selecting Accurate Alignments

IPSJ Transactions on Bioinformatics ◽

10.2197/ipsjtbio.4.2 ◽

2011 ◽

Vol 4 ◽

pp. 2-8 ◽

Author(s):

Akito Taneda

Keyword(s):

Sequence Alignment ◽

Rna Sequence ◽

Multi Objective

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A Multigroup Parallel Genetic Algorithm for Multiple Sequence Alignment

Artificial Intelligence and Computational Intelligence - Lecture Notes in Computer Science ◽

10.1007/978-3-642-23881-9_41 ◽

2011 ◽

pp. 308-316 ◽

Author(s):

Jiawei Luo ◽

Li Zhang ◽

Cheng Liang

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Parallel Genetic Algorithm ◽

Multiple Sequence

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Ant Colony with Genetic Algorithm Based on Planar Graph for Multiple Sequence Alignment

Information Technology Journal ◽

10.3923/itj.2010.274.281 ◽

2010 ◽

Vol 9 (2) ◽

pp. 274-281 ◽

Author(s):

Xuyu Xiang ◽

Dafan Zhang ◽

Jiaohua Qin ◽

Yuanyuan Fu

Keyword(s):

Genetic Algorithm ◽

Planar Graph ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Multiple Sequence

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Multi-objective pairwise RNA sequence alignment

Bioinformatics ◽

10.1093/bioinformatics/btq439 ◽

2010 ◽

Vol 26 (19) ◽

pp. 2383-2390 ◽

Author(s):

Akito Taneda

Keyword(s):

Sequence Alignment ◽

Rna Sequence ◽

Multi Objective

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Bacterial Foraging Optimization –Genetic Algorithm for Multiple Sequence Alignment with Multi-Objectives

Scientific Reports ◽

10.1038/s41598-017-09499-1 ◽

2017 ◽

Vol 7 (1) ◽

Author(s):

P. Manikandan ◽

D. Ramyachitra

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Bacterial Foraging Optimization ◽

Multiple Sequence ◽

Bacterial Foraging

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Multiple Sequence Alignment Using Genetic Algorithm and Non-Dominant Sorting Genetic Algorithm-II (NSGA II) and Variants

Journal of Bioinformatics and Intelligent Control ◽

10.1166/jbic.2014.1104 ◽

2015 ◽

Vol 3 (4) ◽

pp. 294-299

Author(s):

Omprakash Kaiwartya ◽

Shiv Prakash ◽

Ahmed Nazar Hassan

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Nsga Ii ◽

Multiple Sequence

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Multiple sequence alignment by quantum genetic algorithm

Proceedings 20th IEEE International Parallel & Distributed Processing Symposium ◽

10.1109/ipdps.2006.1639617 ◽

2006 ◽

Author(s):

Abdesslem Layeb ◽

Soham Meshoul ◽

Mohamed Batouche

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Multiple Sequence ◽

Quantum Genetic Algorithm

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HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy

Bioinformatics ◽

10.1093/bioinformatics/btv177 ◽

2015 ◽

Vol 31 (15) ◽

pp. 2475-2481 ◽

Author(s):

Quan Zou ◽

Qinghua Hu ◽

Maozu Guo ◽

Guohua Wang

Keyword(s):

Sequence Alignment ◽

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