Function constrains network architecture and dynamics: A case study on the yeast cell cycle Boolean network

Physical Review E ◽

10.1103/physreve.75.051907 ◽

2007 ◽

Vol 75 (5) ◽

Author(s):

Kai-Yeung Lau ◽

Surya Ganguli ◽

Chao Tang

Keyword(s):

Network Architecture ◽

Boolean Network ◽

Yeast Cell Cycle

Download Full-text

Budding yeast cell cycle modeled by context-sensitive probabilistic Boolean network

2009 IEEE International Workshop on Genomic Signal Processing and Statistics ◽

10.1109/gensips.2009.5174356 ◽

2009 ◽

Author(s):

Ronaldo Fumio Hashimoto ◽

Henrique Stagni ◽

Carlos Henrique Aguena Higa

Keyword(s):

Boolean Network ◽

Budding Yeast ◽

Yeast Cell Cycle ◽

Probabilistic Boolean Network ◽

Context Sensitive ◽

Budding Yeast Cell Cycle

Download Full-text

Neutral space analysis for a Boolean network model of the fission yeast cell cycle network

Biological Research ◽

10.1186/0717-6287-47-64 ◽

2014 ◽

Vol 47 (1) ◽

pp. 64 ◽

Author(s):

Gonzalo A Ruz ◽

Tania Timmermann ◽

Javiera Barrera ◽

Eric Goles

Keyword(s):

Fission Yeast ◽

Network Model ◽

Boolean Network ◽

Yeast Cell Cycle ◽

Space Analysis ◽

Fission Yeast Cell ◽

Boolean Network Model ◽

Download Full-text

A new framework for identifying combinatorial regulation of transcription factors: A case study of the yeast cell cycle

Journal of Biomedical Informatics ◽

10.1016/j.jbi.2007.02.003 ◽

2007 ◽

Vol 40 (6) ◽

pp. 707-725 ◽

Author(s):

Junbai Wang

Keyword(s):

Transcription Factors ◽

Yeast Cell Cycle ◽

Regulation Of Transcription ◽

Combinatorial Regulation ◽

Download Full-text

Hybrid ODE/SSA Model of the Budding Yeast Cell Cycle Control Mechanism with Mutant Case Study

Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics - ACM-BCB '17 ◽

10.1145/3107411.3107437 ◽

2017 ◽

Author(s):

Mansooreh Ahmadian ◽

Shuo Wang ◽

John Tyson ◽

Young Cao

Keyword(s):

Control Mechanism ◽

Budding Yeast ◽

Cell Cycle Control ◽

Yeast Cell Cycle ◽

Budding Yeast Cell Cycle

Download Full-text

CODING BIOLOGICAL SYSTEMS IN A STOCHASTIC FRAMEWORK - The Case Study of Budding Yeast Cell Cycle

Proceedings of the First International Conference on Bioinformatics ◽

10.5220/0002739601530159 ◽

2010 ◽

Keyword(s):

Budding Yeast ◽

Biological Systems ◽

Yeast Cell Cycle ◽

Stochastic Framework ◽

Budding Yeast Cell Cycle

Download Full-text

Temporal dynamics of protein complexes in PPI Networks: a case study using yeast cell cycle dynamics

BMC Bioinformatics ◽

10.1186/1471-2105-13-s17-s16 ◽

2012 ◽

Vol 13 (S17) ◽

Author(s):

Sriganesh Srihari ◽

Hon Wai Leong

Keyword(s):

Temporal Dynamics ◽

Protein Complexes ◽

Yeast Cell Cycle ◽

Ppi Networks ◽

Cell Cycle Dynamics

Download Full-text

Robustness and topology of the yeast cell cycle Boolean network

FEBS Letters ◽

10.1016/j.febslet.2009.02.010 ◽

2009 ◽

Vol 583 (5) ◽

pp. 927-932 ◽

Author(s):

Wen-Bin Lee ◽

Jiun-Yan Huang

Keyword(s):

Boolean Network ◽

Yeast Cell Cycle ◽

Download Full-text

Faculty Opinions recommendation of Periodic gene expression program of the fission yeast cell cycle.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1019666.222507 ◽

2004 ◽

Author(s):

Robert P Fisher

Keyword(s):

Gene Expression ◽

Fission Yeast ◽

Gene Expression Program ◽

Yeast Cell Cycle ◽

Fission Yeast Cell ◽

Periodic Gene ◽

Expression Program ◽

Periodic Gene Expression

Download Full-text

Faculty Opinions recommendation of Dynamic complex formation during the yeast cell cycle.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1024798.292859 ◽

2005 ◽

Author(s):

Andrius Kazlauskas

Keyword(s):

Complex Formation ◽

Yeast Cell Cycle

Download Full-text

Faculty Opinions recommendation of Dynamic complex formation during the yeast cell cycle.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1024798.325069 ◽

2005 ◽

Author(s):

Jürg Bahler

Keyword(s):

Complex Formation ◽

Yeast Cell Cycle

Download Full-text