scholarly journals Pair-distribution functions of two-temperature two-mass systems: Comparison of molecular dynamics, classical-map hypernetted chain, quantum Monte Carlo, and Kohn-Sham calculations for dense hydrogen

2008 ◽  
Vol 77 (2) ◽  
Author(s):  
M. W. C. Dharma-wardana ◽  
Michael S. Murillo
2010 ◽  
Vol 82 (10) ◽  
pp. 1943-1955 ◽  
Author(s):  
Maksym Druchok ◽  
Vojko Vlachy

An explicit water molecular dynamics (MD) simulation is presented of a solution modeling aliphatic 6,6-ionene oligocations mixed with low-molecular-weight electrolytes. In all cases, the co-ions were sodium cations and the counterions were fluoride, chloride, bromide, or iodide anions. The simple point charge/extended (SPC/E) model was used to describe water. The results of the simulation at T = 278 K (the data for 298 K were obtained earlier) and T = 318 K are presented in the form of pair distributions between various atoms and/or between ions in the system. We were interested in how temperature variation modifies the ion-specific effects, revealed by the various pair distribution functions (PDFs). The results were compared with previous calculations for the less hydrophobic 3,3-ionene solutions. Simulations of 6,6-ionene solutions containing mixtures of fluoride and iodide counter-ions at T = 298 K were also presented.


2013 ◽  
Vol 91 (7) ◽  
pp. 505-510 ◽  
Author(s):  
Stuart M. Rothstein

The most commonly employed diffusion Monte Carlo algorithm and some of its variants afford a way to sample configuration space from a so-called “mixed distribution”, the product of an input trial solution to the Schrödinger equation for the ground state and its unknown exact solution. This mixed distribution is sufficient to compute the ground state energy and other properties represented by operators that commute with the Hamiltonian. These energy-related properties are exact, save for a small bias introduced by the input trial function’s incorrect exchange nodes, the so-called “fixed-node error”. However, properties represented by operators that commute with the position operator are also of interest. When calculated by sampling from the mixed distribution, these properties are much more strongly biased by the input trial function. Our objective is to review methods that allow sampling from the desired “pure” distribution, one that is unbiased except for the exchange node error. Thereby, one accurately calculates physical properties such as the dipole and other electrical moments, electrical response properties of molecules, and particle distribution functions for clusters. We survey the results of calculations that employ pure-sampling methods through what has been published in year 2012. Our review also touches on truly exact sampling methods.


2015 ◽  
Vol 142 (14) ◽  
pp. 144111 ◽  
Author(s):  
Andrea Zen ◽  
Ye Luo ◽  
Guglielmo Mazzola ◽  
Leonardo Guidoni ◽  
Sandro Sorella

2010 ◽  
Vol 72 ◽  
pp. 337-342
Author(s):  
Masakazu Yarimitsu ◽  
Masaru Aniya

The pressure dependence of the diffusion coefficient in the superionic α- and β-phases of Ag3SI has been studied by using the method of molecular dynamics. It is shown that in the high temperature α-phase, the Ag diffusion coefficient decreases with pressure. On the hand, in the intermediate temperature β-phase, the Ag diffusion coefficient exhibits a maximum at around 2.8 GPa. The structural origin of this behavior is discussed through the pressure dependence of the pair distribution functions.


2014 ◽  
Vol 1035 ◽  
pp. 502-507
Author(s):  
Li An Chen

The structure and properties of the GexAsxS100-2x have been studied by ab initio molecular dynamics simulation. By calculating the pair distribution functions, bond angle distribution functions, we analyze the structure and properties of the alloys. Calculations show that Ge and As are all well combined with S atoms. When x is smaller than 25.0 the binding increases with x , when x is larger than 25.0 the binding decreases with increasing x . The intervention of As atom does not affect the GeS2 formation in Ge40As40S80


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