scholarly journals Direct Evaluation of Rare Events in Active Matter from Variational Path Sampling

2022 ◽  
Vol 128 (2) ◽  
Author(s):  
Avishek Das ◽  
Benjamin Kuznets-Speck ◽  
David T. Limmer
2017 ◽  
Vol 147 (15) ◽  
pp. 152716 ◽  
Author(s):  
Hendrik Jung ◽  
Kei-ichi Okazaki ◽  
Gerhard Hummer

2015 ◽  
Vol 143 (13) ◽  
pp. 134121 ◽  
Author(s):  
Pierre Terrier ◽  
Mihai-Cosmin Marinica ◽  
Manuel Athènes

2008 ◽  
Vol 128 (14) ◽  
pp. 144104 ◽  
Author(s):  
Manan Chopra ◽  
Rohit Malshe ◽  
Allam S. Reddy ◽  
J. J. de Pablo

2020 ◽  
Author(s):  
Paul A. Torrillo ◽  
Anthony T. Bogetti ◽  
Lillian T. Chong

AbstractA promising approach for simulating rare events with rigorous kinetics is the weighted ensemble path sampling strategy. One challenge of this strategy is the division of configurational space into bins for sampling. Here we present a minimal adaptive binning (MAB) scheme for the automated, adaptive placement of bins along a progress coordinate within the framework of the weighted ensemble strategy. Results reveal that the MAB binning scheme, despite its simplicity, is more efficient than a manual, fixed binning scheme in generating transitions over large free energy barriers, generating a diversity of pathways, estimating rate constants, and sampling conformations. The scheme is general and extensible to any rare-events sampling strategy that employs progress coordinates.


2017 ◽  
Vol 43 ◽  
pp. 88-94 ◽  
Author(s):  
Lillian T Chong ◽  
Ali S Saglam ◽  
Daniel M Zuckerman

1879 ◽  
Vol 8 (208supp) ◽  
pp. 3313-3313
Author(s):  
M. Dubrunfaut
Keyword(s):  

2020 ◽  
Vol 39 (6) ◽  
pp. 8463-8475
Author(s):  
Palanivel Srinivasan ◽  
Manivannan Doraipandian

Rare event detections are performed using spatial domain and frequency domain-based procedures. Omnipresent surveillance camera footages are increasing exponentially due course the time. Monitoring all the events manually is an insignificant and more time-consuming process. Therefore, an automated rare event detection contrivance is required to make this process manageable. In this work, a Context-Free Grammar (CFG) is developed for detecting rare events from a video stream and Artificial Neural Network (ANN) is used to train CFG. A set of dedicated algorithms are used to perform frame split process, edge detection, background subtraction and convert the processed data into CFG. The developed CFG is converted into nodes and edges to form a graph. The graph is given to the input layer of an ANN to classify normal and rare event classes. Graph derived from CFG using input video stream is used to train ANN Further the performance of developed Artificial Neural Network Based Context-Free Grammar – Rare Event Detection (ACFG-RED) is compared with other existing techniques and performance metrics such as accuracy, precision, sensitivity, recall, average processing time and average processing power are used for performance estimation and analyzed. Better performance metrics values have been observed for the ANN-CFG model compared with other techniques. The developed model will provide a better solution in detecting rare events using video streams.


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