scholarly journals Classification of local chemical environments from x-ray absorption spectra using supervised machine learning

Author(s):  
Matthew R. Carbone ◽  
Shinjae Yoo ◽  
Mehmet Topsakal ◽  
Deyu Lu
2020 ◽  
Author(s):  
Conor Rankine ◽  
Marwah Madkhali ◽  
Thomas Penfold

<p>X-ray spectroscopy delivers strong impact across the physical and biological sciences by providing end-users with highly-detailed information about the electronic and geometric structure of matter. To decode this information in challenging cases, e.g. <i>in operando</i> catalysts, batteries, and temporally-evolving systems, advanced theoretical calculations are necessary. The complexity and resource requirements often render these out of reach for end-users, and therefore data are often not interpreted exhaustively, leaving a wealth of valuable information unexploited. In this paper, we introduce supervised machine learning of X-ray absorption spectra, by developing a deep neural network (DNN) that is able to estimate Fe K-edge X-ray absorption near-edge structure spectra in less </p><p>than a second with no input beyond geometric information about the local environment of the absorption site. We predict peak positions with sub-eV accuracy and peak intensities with errors over an order of magnitude smaller than the spectral variations that the model is engineered to capture. The performance of the DNN is promising, as illustrated by its application to the structural refinement of iron(II)tris(bipyridine) and nitrosylmyoglobin, but also highlights areas for which future developments should focus.</p>


2020 ◽  
Vol 124 (15) ◽  
Author(s):  
Matthew R. Carbone ◽  
Mehmet Topsakal ◽  
Deyu Lu ◽  
Shinjae Yoo

2020 ◽  
Author(s):  
Conor Rankine ◽  
Marwah Madkhali ◽  
Thomas Penfold

<p>X-ray spectroscopy delivers strong impact across the physical and biological sciences by providing end-users with highly-detailed information about the electronic and geometric structure of matter. To decode this information in challenging cases, e.g. <i>in operando</i> catalysts, batteries, and temporally-evolving systems, advanced theoretical calculations are necessary. The complexity and resource requirements often render these out of reach for end-users, and therefore data are often not interpreted exhaustively, leaving a wealth of valuable information unexploited. In this paper, we introduce supervised machine learning of X-ray absorption spectra, by developing a deep neural network (DNN) that is able to estimate Fe K-edge X-ray absorption near-edge structure spectra in less </p><p>than a second with no input beyond geometric information about the local environment of the absorption site. We predict peak positions with sub-eV accuracy and peak intensities with errors over an order of magnitude smaller than the spectral variations that the model is engineered to capture. The performance of the DNN is promising, as illustrated by its application to the structural refinement of iron(II)tris(bipyridine) and nitrosylmyoglobin, but also highlights areas for which future developments should focus.</p>


Author(s):  
Samantha Tetef ◽  
Niranjan Govind ◽  
Gerald T. Seidler

We utilize unsupervised machine learning to extract chemically relevant information in X-ray absorption near-edge structure (XANES) and in valence-to-core X-ray emission spectra (VtC-XES) for classification of an ensemble of sulphorganic molecules.


2019 ◽  
Vol 4 (5) ◽  
pp. 1014-1018 ◽  
Author(s):  
Itsuki Miyazato ◽  
Lauren Takahashi ◽  
Keisuke Takahashi

Oxidation states of materials are characterized by the X-ray absorption near edge structure (XANES) region in X-ray absorption spectroscopy (XAS).


2014 ◽  
Vol 52 (12) ◽  
pp. 1025-1029
Author(s):  
Min-Wook Oh ◽  
Tae-Gu Kang ◽  
Byungki Ryu ◽  
Ji Eun Lee ◽  
Sung-Jae Joo ◽  
...  

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