Post-surgical Endometriosis Segmentation in Laparoscopic Videos

Author(s):  
Andreas Leibetseder ◽  
Klaus Schoeffmann ◽  
Jorg Keckstein ◽  
Simon Keckstein
Keyword(s):  
2012 ◽  
Author(s):  
Udo von Öhsen ◽  
Jan Marek Marcinczak ◽  
Andres F. Mármol Vélez ◽  
Rolf-Rainer Grigat

F1000Research ◽  
2021 ◽  
Vol 10 ◽  
pp. 1010
Author(s):  
Nouar AlDahoul ◽  
Hezerul Abdul Karim ◽  
Abdulaziz Saleh Ba Wazir ◽  
Myles Joshua Toledo Tan ◽  
Mohammad Faizal Ahmad Fauzi

Background: Laparoscopy is a surgery performed in the abdomen without making large incisions in the skin and with the aid of a video camera, resulting in laparoscopic videos. The laparoscopic video is prone to various distortions such as noise, smoke, uneven illumination, defocus blur, and motion blur. One of the main components in the feedback loop of video enhancement systems is distortion identification, which automatically classifies the distortions affecting the videos and selects the video enhancement algorithm accordingly. This paper aims to address the laparoscopic video distortion identification problem by developing fast and accurate multi-label distortion classification using a deep learning model. Current deep learning solutions based on convolutional neural networks (CNNs) can address laparoscopic video distortion classification, but they learn only spatial information. Methods: In this paper, utilization of both spatial and temporal features in a CNN-long short-term memory (CNN-LSTM) model is proposed as a novel solution to enhance the classification. First, pre-trained ResNet50 CNN was used to extract spatial features from each video frame by transferring representation from large-scale natural images to laparoscopic images. Next, LSTM was utilized to consider the temporal relation between the features extracted from the laparoscopic video frames to produce multi-label categories. A novel laparoscopic video dataset proposed in the ICIP2020 challenge was used for training and evaluation of the proposed method. Results: The experiments conducted show that the proposed CNN-LSTM outperforms the existing solutions in terms of accuracy (85%), and F1-score (94.2%). Additionally, the proposed distortion identification model is able to run in real-time with low inference time (0.15 sec). Conclusions: The proposed CNN-LSTM model is a feasible solution to be utilized in laparoscopic videos for distortion identification.


2019 ◽  
Vol 5 (1) ◽  
pp. 405-407
Author(s):  
Nour Aldeen Jalal ◽  
Tamer Abdulbaki Alshirbaji ◽  
Knut Möller

AbstractOnline recognition of surgical phases is essential to develop systems able to effectively conceive the workflow and provide relevant information to surgical staff during surgical procedures. These systems, known as context-aware system (CAS), are designed to assist surgeons, improve scheduling efficiency of operating rooms (ORs) and surgical team and promote a comprehensive perception and awareness of the OR. State-of-the-art studies for recognizing surgical phases have made use of data from different sources such as videos or binary usage signals from surgical tools. In this work, we propose a deep learning pipeline, namely a convolutional neural network (CNN) and a nonlinear autoregressive network with exogenous inputs (NARX), designed to predict surgical phases from laparoscopic videos. A convolutional neural network (CNN) is used to perform the tool classification task by automatically learning visual features from laparoscopic videos. The output of the CNN, which represents binary usage signals of surgical tools, is provided to a NARX neural network that performs a multistep-ahead predictions of surgical phases. Surgical phase prediction performance of the proposed pipeline was evaluated on a dataset of 80 cholecystectomy videos (Cholec80 dataset). Results show that the NARX model provides a good modelling of the temporal dependencies between surgical phases. However, more input signals are needed to improve the recognition accuracy.


2018 ◽  
Vol 165 ◽  
pp. 13-23 ◽  
Author(s):  
Constantinos Loukas ◽  
Christos Varytimidis ◽  
Konstantinos Rapantzikos ◽  
Meletios A. Kanakis

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