An exact algorithm for determining protein backbone structure from NH residual dipolar couplings

Exact Algorithm ◽

Dipolar Couplings ◽

Protein Backbone ◽

Improvements to REDCRAFT: a software tool for simultaneous characterization of protein backbone structure and dynamics from residual dipolar couplings

Journal of Biomolecular NMR ◽

10.1007/s10858-014-9871-x ◽

2014 ◽

Vol 60 (4) ◽

pp. 241-264 ◽

Cited By ~ 6

Author(s):

Mikhail Simin ◽

Stephanie Irausquin ◽

Casey A. Cole ◽

Homayoun Valafar

Keyword(s):

Software Tool ◽

Dipolar Couplings ◽

Protein Backbone ◽

Structure And Dynamics ◽

Faculty Opinions recommendation of De novo determination of protein backbone structure from residual dipolar couplings using Rosetta.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1006182.77113 ◽

2002 ◽

Author(s):

Kristina Downing

Keyword(s):

De Novo ◽

Dipolar Couplings ◽

Protein Backbone ◽

Algorithms and Analytic Solutions Using Sparse Residual Dipolar Couplings for High-Resolution Automated Protein Backbone Structure Determination by NMR

Springer Tracts in Advanced Robotics - Algorithmic Foundations of Robotics IX ◽

10.1007/978-3-642-17452-0_21 ◽

2010 ◽

pp. 355-372 ◽

Cited By ~ 5

Author(s):

Anna Yershova ◽

Chittaranjan Tripathy ◽

Pei Zhou ◽

Bruce Randall Donald

Keyword(s):

High Resolution ◽

Structure Determination ◽

Analytic Solutions ◽

Dipolar Couplings ◽

Protein Backbone ◽

De Novo Determination of Protein Backbone Structure from Residual Dipolar Couplings Using Rosetta

Journal of the American Chemical Society ◽

10.1021/ja016880e ◽

2002 ◽

Vol 124 (11) ◽

pp. 2723-2729 ◽

Cited By ~ 118

Author(s):

Carol A. Rohl ◽

David Baker

Keyword(s):

De Novo ◽

Dipolar Couplings ◽

Protein Backbone ◽

Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004. ◽

Analysis of a systematic search-based algorithm for determining protein backbone structure from a minimum number of residual dipolar couplings

10.1109/csb.2004.1332445 ◽

2004 ◽

Author(s):

Lincong Wang ◽

B.R. Donald

Keyword(s):

Dipolar Couplings ◽

Systematic Search ◽

Protein Backbone ◽

Minimum Number ◽

Determination of Protein Backbone Structure Using Only Residual Dipolar Couplings

Journal of the American Chemical Society ◽

10.1021/ja005590f ◽

2001 ◽

Vol 123 (7) ◽

pp. 1541-1542 ◽

Cited By ~ 105

Author(s):

Jean-Christophe Hus ◽

Dominique Marion ◽

Martin Blackledge

Keyword(s):

Dipolar Couplings ◽

Protein Backbone ◽

Simultaneous Determination of Protein Backbone Structure and Dynamics from Residual Dipolar Couplings

Journal of the American Chemical Society ◽

10.1021/ja066704b ◽

2006 ◽

Vol 128 (47) ◽

pp. 15100-15101 ◽

Cited By ~ 55

Author(s):

Guillaume Bouvignies ◽

Phineus Markwick ◽

Rafael Brüschweiler ◽

Martin Blackledge

Keyword(s):

Simultaneous Determination ◽

Dipolar Couplings ◽

Protein Backbone ◽

Structure And Dynamics ◽

Exact Solutions for Internuclear Vectors and Backbone Dihedral Angles from NH Residual Dipolar Couplings in Two Media, and their Application in a Systematic Search Algorithm for Determining Protein Backbone Structure

Journal of Biomolecular NMR ◽

10.1023/b:jnmr.0000032552.69386.ea ◽

2004 ◽

Vol 29 (3) ◽

pp. 223-242 ◽

Cited By ~ 38

Author(s):

Lincong Wang ◽

Bruce Randall Donald

Keyword(s):

Exact Solutions ◽

Search Algorithm ◽

Dipolar Couplings ◽

Systematic Search ◽

Dihedral Angles ◽

Protein Backbone ◽

Protein backbone motions viewed by intraresidue and sequential HN–Hα residual dipolar couplings

Journal of Biomolecular NMR ◽

10.1007/s10858-008-9237-3 ◽

2008 ◽

Vol 41 (1) ◽

pp. 17-28 ◽

Cited By ~ 25

Author(s):

Beat Vögeli ◽

Lishan Yao ◽

Ad Bax

Keyword(s):

Dipolar Couplings ◽

Protein Backbone

Ultrahigh-Resolution Backbone Structure of Perdeuterated Protein GB1 Using Residual Dipolar Couplings from Two Alignment Media

Angewandte Chemie International Edition ◽

10.1002/anie.200603627 ◽

2006 ◽

Vol 45 (48) ◽

pp. 8166-8169 ◽

Cited By ~ 21

Author(s):

Guillaume Bouvignies ◽

Sebastian Meier ◽

Stephan Grzesiek ◽

Martin Blackledge

Keyword(s):

Dipolar Couplings ◽

Ultrahigh Resolution ◽

Backbone Structure ◽

Protein Gb1