Liver tumor segmentation in noisy CT images using distance regularized level set evolution based on fuzzy C-means clustering

2017 ◽  
Author(s):  
P. Yugander ◽  
G. Raghotham Reddy
Keyword(s):  
Level Set ◽  
Liver Tumor ◽  
Ct Images ◽  
Tumor Segmentation ◽  
Fuzzy C Means ◽  
Fuzzy C Means Clustering ◽  
Liver Tumor Segmentation ◽  
Level Set Evolution

Ultrasound liver tumor segmentation using adaptively regularized kernel-based fuzzy C means with enhanced level set algorithm

2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Deepak S. Uplaonkar ◽  
Virupakshappa ◽  
Nagabhushan Patil
Keyword(s):  
Level Set ◽  
Liver Tumor ◽  
Experimental Analysis ◽  
Tumor Segmentation ◽  
Ultrasound Images ◽  
Dice Coefficient ◽  
Content Type ◽  
Fuzzy C Means ◽  
Local Ternary Pattern ◽  
Liver Tumor Segmentation

PurposeThe purpose of this study is to develop a hybrid algorithm for segmenting tumor from ultrasound images of the liver.Design/methodology/approachAfter collecting the ultrasound images, contrast-limited adaptive histogram equalization approach (CLAHE) is applied as preprocessing, in order to enhance the visual quality of the images that helps in better segmentation. Then, adaptively regularized kernel-based fuzzy C means (ARKFCM) is used to segment tumor from the enhanced image along with local ternary pattern combined with selective level set approaches.FindingsThe proposed segmentation algorithm precisely segments the tumor portions from the enhanced images with lower computation cost. The proposed segmentation algorithm is compared with the existing algorithms and ground truth values in terms of Jaccard coefficient, dice coefficient, precision, Matthews correlation coefficient, f-score and accuracy. The experimental analysis shows that the proposed algorithm achieved 99.18% of accuracy and 92.17% of f-score value, which is better than the existing algorithms.Practical implicationsFrom the experimental analysis, the proposed ARKFCM with enhanced level set algorithm obtained better performance in ultrasound liver tumor segmentation related to graph-based algorithm. However, the proposed algorithm showed 3.11% improvement in dice coefficient compared to graph-based algorithm.Originality/valueThe image preprocessing is carried out using CLAHE algorithm. The preprocessed image is segmented by employing selective level set model and Local Ternary Pattern in ARKFCM algorithm. In this research, the proposed algorithm has advantages such as independence of clustering parameters, robustness in preserving the image details and optimal in finding the threshold value that effectively reduces the computational cost.

Liver tumor segmentation based on level set

2018 ◽  
Author(s):  
Qianqian Pan ◽  
Hai Li ◽  
Liwei Zhang ◽  
Li Xia ◽  
Hongzhi Wang
Keyword(s):  
Level Set ◽  
Liver Tumor ◽  
Tumor Segmentation ◽  
Liver Tumor Segmentation

scholarly journals 3D IFPN: Improved Feature Pyramid Network for Automatic Segmentation of Gastric Tumor

2021 ◽  
Vol 11 ◽  
Author(s):  
Haimei Li ◽  
Bing Liu ◽  
Yongtao Zhang ◽  
Chao Fu ◽  
Xiaowei Han ◽  
...  
Keyword(s):  
Liver Tumor ◽  
Feature Fusion ◽  
Automatic Segmentation ◽  
Ct Images ◽  
Learning Ability ◽  
Gastric Tumor ◽  
Tumor Segmentation ◽  
Gastric Tumors ◽  
Multi Level ◽  
Liver Tumor Segmentation

Automatic segmentation of gastric tumor not only provides image-guided clinical diagnosis but also assists radiologists to read images and improve the diagnostic accuracy. However, due to the inhomogeneous intensity distribution of gastric tumors in CT scans, the ambiguous/missing boundaries, and the highly variable shapes of gastric tumors, it is quite challenging to develop an automatic solution. This study designs a novel 3D improved feature pyramidal network (3D IFPN) to automatically segment gastric tumors in computed tomography (CT) images. To meet the challenges of this extremely difficult task, the proposed 3D IFPN makes full use of the complementary information within the low and high layers of deep convolutional neural networks, which is equipped with three types of feature enhancement modules: 3D adaptive spatial feature fusion (ASFF) module, single-level feature refinement (SLFR) module, and multi-level feature refinement (MLFR) module. The 3D ASFF module adaptively suppresses the feature inconsistency in different levels and hence obtains the multi-level features with high feature invariance. Then, the SLFR module combines the adaptive features and previous multi-level features at each level to generate the multi-level refined features by skip connection and attention mechanism. The MLFR module adaptively recalibrates the channel-wise and spatial-wise responses by adding the attention operation, which improves the prediction capability of the network. Furthermore, a stage-wise deep supervision (SDS) mechanism and a hybrid loss function are also embedded to enhance the feature learning ability of the network. CT volumes dataset collected in three Chinese medical centers was used to evaluate the segmentation performance of the proposed 3D IFPN model. Experimental results indicate that our method outperforms state-of-the-art segmentation networks in gastric tumor segmentation. Moreover, to explore the generalization for other segmentation tasks, we also extend the proposed network to liver tumor segmentation in CT images of the MICCAI 2017 Liver Tumor Segmentation Challenge.

scholarly journals Adaptive Attention Convolutional Neural Network for Liver Tumor Segmentation

2021 ◽  
Vol 11 ◽  
Author(s):  
Shunyao Luan ◽  
Xudong Xue ◽  
Yi Ding ◽  
Wei Wei ◽  
Benpeng Zhu
Keyword(s):  
Neural Network ◽  
Liver Tumor ◽  
Semantic Information ◽  
Liver Tumors ◽  
Ct Images ◽  
Attention Mechanism ◽  
Tumor Segmentation ◽  
Expansion Path ◽  
Liver Tumor Segmentation ◽  
End To End

PurposeAccurate segmentation of liver and liver tumors is critical for radiotherapy. Liver tumor segmentation, however, remains a difficult and relevant problem in the field of medical image processing because of the various factors like complex and variable location, size, and shape of liver tumors, low contrast between tumors and normal tissues, and blurred or difficult-to-define lesion boundaries. In this paper, we proposed a neural network (S-Net) that can incorporate attention mechanisms to end-to-end segmentation of liver tumors from CT images.MethodsFirst, this study adopted a classical coding-decoding structure to realize end-to-end segmentation. Next, we introduced an attention mechanism between the contraction path and the expansion path so that the network could encode a longer range of semantic information in the local features and find the corresponding relationship between different channels. Then, we introduced long-hop connections between the layers of the contraction path and the expansion path, so that the semantic information extracted in both paths could be fused. Finally, the application of closed operation was used to dissipate the narrow interruptions and long, thin divide. This eliminated small cavities and produced a noise reduction effect.ResultsIn this paper, we used the MICCAI 2017 liver tumor segmentation (LiTS) challenge dataset, 3DIRCADb dataset and doctors’ manual contours of Hubei Cancer Hospital dataset to test the network architecture. We calculated the Dice Global (DG) score, Dice per Case (DC) score, volumetric overlap error (VOE), average symmetric surface distance (ASSD), and root mean square error (RMSE) to evaluate the accuracy of the architecture for liver tumor segmentation. The segmentation DG for tumor was found to be 0.7555, DC was 0.613, VOE was 0.413, ASSD was 1.186 and RMSE was 1.804. For a small tumor, DG was 0.3246 and DC was 0.3082. For a large tumor, DG was 0.7819 and DC was 0.7632.ConclusionS-Net obtained more semantic information with the introduction of an attention mechanism and long jump connection. Experimental results showed that this method effectively improved the effect of tumor recognition in CT images and could be applied to assist doctors in clinical treatment.

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