scholarly journals Utility of whole‐exome sequencing for those near the end of the diagnostic odyssey: time to address gaps in care

2015 ◽  
Vol 89 (3) ◽  
pp. 275-284 ◽  
Author(s):  
S.L. Sawyer ◽  
T. Hartley ◽  
D.A. Dyment ◽  
C.L. Beaulieu ◽  
J. Schwartzentruber ◽  
...  
2019 ◽  
Vol 50 (02) ◽  
pp. 096-102 ◽  
Author(s):  
Matthew Pastore ◽  
Rachel Schrader ◽  
Emily Sites ◽  
Dennis Bartholomew ◽  
Chang-Yong Tsao ◽  
...  

AbstractNext-generation sequencing is a powerful diagnostic tool, yet it has proven inadequate to establish a diagnosis in all cases of congenital hypotonia or childhood onset weakness. We sought to describe the impact of whole exome sequencing (WES), which has only recently become widely available clinically, on molecular diagnosis in the Nationwide Children's Hospital Neuromuscular clinics. We reviewed records of all patients in our clinic with pediatric onset of symptoms who had WES done since 2013. Patients were included if clinical suspicion was high for a neuromuscular disease. Clinical WES was performed in 30 families, representing 31 patients, all of whom were seen for hypotonia, weakness, or gait disturbance. Probands had between 2 and 12 genetic diagnostic tests prior to obtaining WES. A genetic diagnosis was established in 11 families (37%), and in 12 patients (39%), with mutations in 10 different genes. Five of these genes have only been associated with disease since 2013, and were not previously represented on clinically available disease gene panels. Our results confirm the utility of WES in the clinical setting, particularly for genetically heterogeneous syndromes. The availability of WES can provide an end to the diagnostic odyssey for parents and allow for expansion of phenotypes.


2015 ◽  
Vol 5 ◽  
pp. 15-18 ◽  
Author(s):  
Carlos A. Bacino ◽  
Yu-Hsin Chao ◽  
Elaine Seto ◽  
Tim Lotze ◽  
Fan Xia ◽  
...  

2016 ◽  
Vol 89 (6) ◽  
pp. 700-707 ◽  
Author(s):  
J. Thevenon ◽  
Y. Duffourd ◽  
A. Masurel-Paulet ◽  
M. Lefebvre ◽  
F. Feillet ◽  
...  

2021 ◽  
Vol 45 (6) ◽  
pp. 259-266
Author(s):  
Ching-Wan Lam

Abstract Objectives Most rare diseases are genetic diseases. Due to the diversity of rare diseases and the high likelihood of patients with rare diseases to be undiagnosed or misdiagnosed, it is not unusual that these patients undergo a long diagnostic odyssey before they receive a definitive diagnosis. This situation presents a clear need to set up a dedicated clinical service to end the diagnostic odyssey of patients with rare diseases. Methods Therefore, in 2014, we started an Undiagnosed Diseases Program in Hong Kong with the aim of ending the diagnostic odyssey of patients and families with rare diseases by clinical whole-exome sequencing (CWES), who have not received a definitive diagnosis after extensive investigation. Results In this program, we have shown that genetic diseases diagnosed by CWES were different from that using traditional approaches indicating that CWES is an essential tool to diagnose rare diseases and ending diagnostic odysseys. In addition, we identified several novel genes responsible for monogenic diseases. These include the TOP2B gene for autism spectrum disorder, the DTYMK gene for severe cerebral atrophy, the KIF13A gene for a new mosaic ectodermal syndrome associated with hypomelanosis of Ito, and the CDC25B gene for a new syndrome of cardiomyopathy and endocrinopathy. Conclusions With the incorporation of CWES in an Undiagnosed Diseases Program, we have ended diagnostic odysseys of patients with rare diseases in Hong Kong in the past 7 years. In this program, we have shown that CWES is an essential tool to end diagnostic odysseys. With the declining cost of next-generation sequencers and reagents, CWES set-ups are now affordable for clinical laboratories. Indeed, owing to the increasing availability of CWES and treatment modalities for rare diseases, precedence can be given to both common and rare medical conditions.


2016 ◽  
Vol 91 (3) ◽  
pp. 297-307 ◽  
Author(s):  
Konstantinos N. Lazaridis ◽  
Kimberly A. Schahl ◽  
Margot A. Cousin ◽  
Dusica Babovic-Vuksanovic ◽  
Douglas L. Riegert-Johnson ◽  
...  

2017 ◽  
Vol 5 (3) ◽  
pp. 269-279 ◽  
Author(s):  
Margot A. Cousin ◽  
Eric T. Matey ◽  
Patrick R. Blackburn ◽  
Nicole J. Boczek ◽  
Tammy M. McAllister ◽  
...  

2014 ◽  
Vol 62 (S 02) ◽  
Author(s):  
M. Hitz ◽  
S. Al-Turki ◽  
A. Schalinski ◽  
U. Bauer ◽  
T. Pickardt ◽  
...  

2018 ◽  
Author(s):  
Yasemin Dincer ◽  
Michael Zech ◽  
Matias Wagner ◽  
Nikolai Jung ◽  
Volker Mall ◽  
...  

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