Use of allele‐specific sequencing primers is an efficient alternative to PCR subcloning of low‐copy nuclear genes

2011 ◽  
Vol 12 (1) ◽  
pp. 128-135 ◽  
Author(s):  
ANNE‐CATHRINE SCHEEN ◽  
BERNARD E. PFEIL ◽  
ANNA PETRI ◽  
NAHID HEIDARI ◽  
STEPHAN NYLINDER ◽  
...  
Keyword(s):  
Nuclear Genes ◽  
Allele Specific ◽  
Efficient Alternative ◽  
Allele Specific Sequencing

NovelNAT2haplotyping using allele-specific sequencing

2014 ◽  
Vol 15 (8) ◽  
pp. 1117-1124 ◽  
Author(s):  
Seong-Ho Kang ◽  
Geon Park ◽  
Sook Jin Jang ◽  
Dae-Soo Moon
Keyword(s):  
Allele Specific ◽  
Allele Specific Sequencing

scholarly journals WASP: allele-specific software for robust discovery of molecular quantitative trait loci

2014 ◽  
Author(s):  
Bryce van de Geijn ◽  
Graham McVicker ◽  
Yoav Gilad ◽  
Jonathan Pritchard
Keyword(s):  
Quantitative Trait Loci ◽  
Qtl Mapping ◽  
Error Rate ◽  
Quantitative Trait ◽  
Rna Seq ◽  
Read Mapping ◽  
Trait Loci ◽  
Allele Specific ◽  
Allele Specific Sequencing

Allele-specific sequencing reads provide a powerful signal for identifying molecular quantitative trait loci (QTLs), however they are challenging to analyze and prone to technical artefacts. Here we describe WASP, a suite of tools for unbiased allele-specific read mapping and discovery of molecular QTLs. Using simulated reads, RNA-seq reads and ChIP-seq reads, we demonstrate that our approach has a low error rate and is far more powerful than existing QTL mapping approaches.

scholarly journals Erratum: Corrigendum: Detection of minor drug-resistant populations by parallel allele-specific sequencing

2007 ◽  
Vol 4 (2) ◽  
pp. 187-187
Author(s):  
Fangping Cai ◽  
Haifeng Chen ◽  
Charles B Hicks ◽  
John A Bartlett ◽  
Jun Zhu ◽  
...  
Keyword(s):  
Drug Resistant ◽  
Allele Specific ◽  
Allele Specific Sequencing

Allele-specific sequencing confirms novel prion gene polymorphism in Creutzfeldt-Jakob disease

Neurology ◽  
1991 ◽  
Vol 41 (10) ◽  
pp. 1647-1647 ◽  
Author(s):  
J. K. Fink ◽  
J. T. Warren ◽  
I. Drury ◽  
D. Murman ◽  
M. L. Peacock
Keyword(s):  
Gene Polymorphism ◽  
Prion Gene ◽  
Allele Specific ◽  
Jakob Disease ◽  
Allele Specific Sequencing

Detection of minor drug-resistant populations by parallel allele-specific sequencing

2007 ◽  
Vol 4 (2) ◽  
pp. 123-125 ◽  
Author(s):  
Fangping Cai ◽  
Haifeng Chen ◽  
Charles B Hicks ◽  
John A Bartlett ◽  
Jun Zhu ◽  
...  
Keyword(s):  
Drug Resistant ◽  
Allele Specific ◽  
Allele Specific Sequencing

Three novel HLA-DRB1∗13 alleles detected by PCR-SSOP and confirmed by single allele specific sequencing

2003 ◽  
Vol 64 (10) ◽  
pp. S155
Author(s):  
Dong-Feng Chen ◽  
Lingsheng Dong ◽  
Mark Janzen ◽  
Alan Howard ◽  
Arthur Rabson ◽  
...  
Keyword(s):  
Allele Specific ◽  
Single Allele ◽  
Allele Specific Sequencing
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