AbstractHookworm infection stands out for its worldwide distribution and for its veterinary and public health relevance. Based on copromicroscopic examinations and polymerase chain reaction (PCR) amplification of the ITS1–5.8S–ITS2 region, we assessed, respectively, the prevalence of intestinal parasites and the identification of canine hookworm species in faeces recovered from 278 dogs living in households of an inland municipality of São Paulo State, Brazil. Intestinal parasites were found in 67.3% of dogs and hookworm infection was found at the highest prevalence rate (56.6%), followed byToxocara canis(11.9%),Isosporaspp. (11.9%),Giardiaspp. (5.8%),Sarcocystisspp. (4.0%), ‘Hammondia-like’ (1.4%),Dipylidium caninum(1.1%) andTrichuris vulpis(0.7%). Of 158 samples positive for hookworm eggs, 106 (67.1%) were amplified by PCR and, of those, 88 (55.7%) were successfully sequenced for species identification. Single infections withAncylostoma caninumandAncylostoma braziliensewere recorded in 61.4% and 12.5%, respectively, and mixed infections were found in 26.1%. The nucleotide sequences of both species showed high identity rates (98–100%) when compared with reference sequences. AlthoughA. caninumwas the most prevalent hookworm in the dogs assessed, the occurrence of bothA. caninumandA. braziliensein single and/or mixed infections poses a potential risk for the local population in a low-income area, especially children, to acquire cutaneous larva migrans (CLM).