scholarly journals Draft Genome Sequence of Clostridium cochlearium Strain AGROS13, Isolated from a Sheep Dairy Farm in New Zealand

2020 ◽  
Vol 9 (26) ◽  
Author(s):  
Tanushree B. Gupta ◽  
Paul Maclean ◽  
Ruy Jauregui ◽  
Alexis N. Risson ◽  
Gale Brightwell
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Dairy Farm ◽  
Biosynthetic Gene Cluster ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Content Type ◽  
Clostridium Cochlearium

ABSTRACT We report the draft genome sequence of a new Clostridium cochlearium strain, AGROS13, which was isolated from a sheep dairy farm environment in New Zealand. The genome is 2.7 Mbp, with a GC content of 28.2%. The genome sequence was found to be closely related to that of Clostridium cochlearium ATCC 17787. The new strain harbors a biosynthetic gene cluster coding for an unknown sactipeptide.

scholarly journals Draft Genome Sequence of Clostridium senegalense Strain AGRFS4, Isolated from a Dairy Farm in New Zealand

2020 ◽  
Vol 9 (19) ◽  
Author(s):  
Tanushree B. Gupta ◽  
Ruy Jauregui ◽  
Amila Srilal Nawarathana ◽  
Gale Brightwell ◽  
Paul Maclean
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gc Content ◽  
Dairy Farm ◽  
Draft Genome Sequence ◽  
Content Type

We report the draft genome sequence of a new Clostridium senegalense strain, AGRFS4, which was isolated from a dairy farm environment in the Manawatu region in New Zealand. The genome is 3.98 Mb, with a GC content of 27%. The genome sequence was found to be 86.6% similar to that of the type strain Clostridium senegalense JC122. Until now, no Clostridium senegalense strain from New Zealand has been reported.

scholarly journals Draft Genome Sequence of Pseudomonas saudiphocaensis Strain AGROB56, Isolated from a Dairy Farm in New Zealand

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Tanushree B. Gupta ◽  
Alexis N. Risson ◽  
Ruy Jauregui ◽  
Paul Maclean ◽  
Gale Brightwell
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Dairy Farm ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of a new Pseudomonas saudiphocaensis strain, AGROB56, with lipolytic potential, isolated from a sheep dairy farm in New Zealand. The genome is 3.61 Mbp, with a GC content of 61.1%, and the genome sequence was found closely related to Pseudomonas saudiphocaensis 20 BNT.

scholarly journals Draft Genome Sequence of Pseudomonas nitrititolerans Strain AGROB37, Isolated from a Sheep Dairy Farm in New Zealand

2020 ◽  
Vol 9 (28) ◽  
Author(s):  
Tanushree B. Gupta ◽  
Ruy Jauregui ◽  
Alexis N. Risson ◽  
Gale Brightwell ◽  
Paul Maclean
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gc Content ◽  
Dairy Farm ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT We report the draft genome sequence of a new Pseudomonas nitrititolerans strain, AGROB37, isolated from a sheep dairy farm environment in New Zealand. The genome is 4.19 Mbp long, with a GC content of 63.2%. The genome sequence was found to be closely related to that of the type strain Pseudomonas nitrititolerans GL14.

scholarly journals Draft Genome Sequence of Clostridium cadaveris Strain AGRFS2.2, Isolated from a Bovine Dairy Farm in New Zealand

2020 ◽  
Vol 9 (35) ◽  
Author(s):  
Tanushree B. Gupta ◽  
Ruy Jauregui ◽  
Paul Maclean ◽  
Amila Srilal Nawarathana ◽  
Gale Brightwell
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Dairy Farm ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT We report the draft genome sequence of a new Clostridium cadaveris strain, AGRFS2.2, isolated from soil in a bovine dairy farm environment in New Zealand. The genome is 3.6 Mbp long with a GC content of 31.3%. The genome sequence was found to be closely related to that of Clostridium cadaveris JCM 1392T.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0874, a Catechoserine Producer

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Hisayuki Komaki ◽  
Akira Hosoyama ◽  
Natsuko Ichikawa ◽  
Yasuhiro Igarashi
Keyword(s):  
Genome Sequence ◽  
Cell Invasion ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioinformatic Analysis ◽  
Biosynthetic Gene Cluster ◽  
Tumor Cell Invasion ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Streptomyces Sp

We report the draft genome sequence of Streptomyces sp. TP-A0874 isolated from compost. This strain produces catechoserine, a new catecholate-type inhibitor of tumor cell invasion. The genome harbors at least six gene clusters for polyketide and nonribosomal peptide biosyntheses. The biosynthetic gene cluster for catechoserines was identified by bioinformatic analysis.

scholarly journals Draft Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas pseudoalcaligenes KB-10

2021 ◽  
Vol 10 (20) ◽  
Author(s):  
M. M. A. Khan ◽  
Jin Duan ◽  
Bernard R. Glick ◽  
Patrick M. Finnegan ◽  
Saleh A. Kabli ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Circular Chromosome ◽  
Pseudomonas Pseudoalcaligenes ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

ABSTRACT Pseudomonas pseudoalcaligenes KB-10 can enhance salinity tolerance in coriander plants. We report a draft genome sequence of P. pseudoalcaligenes KB-10, comprising a 5,241,174-bp circular chromosome containing 4,921 genes, with a GC content of 62.97%.

scholarly journals Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Huy Quang Nguyen ◽  
Nguyen Thi-Hanh Vu ◽  
Ha Hoang Chu ◽  
Son Ky Chu ◽  
Ha Hoang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

scholarly journals Draft Genome Sequence of Limisphaera ngatamarikiensis NGM72.4T, a Moderately Alkaliphilic Thermophile Belonging to the Class Verrucomicrobiae

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Carlo R. Carere ◽  
Jason A. Steen ◽  
Philip Hugenholtz ◽  
Matthew B. Stott
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Illumina Hiseq ◽  
Coding Sequences ◽  
Content Type ◽  
Aotearoa New Zealand

Limisphaera ngatamarikiensis NGM72.4T is a thermophilic representative of the class Verrucomicrobiae. Isolated from geothermally heated subaqueous clay sediments from a Ngatamariki hotspring in Aotearoa New Zealand, the 3,908,748-bp genome was sequenced using the Illumina HiSeq 2500 platform. Annotation revealed 3,083 coding sequences, including 3,031 proteins, 3 rRNA genes, and 46 tRNA genes.

scholarly journals Draft Genome Sequence of a New Zealand Isolate of Mycoplasma ovipneumoniae

2020 ◽  
Vol 9 (10) ◽  
Author(s):  
B. J. Bridgeman ◽  
S. K. Gupta ◽  
A. Murray ◽  
V. S. R. Dukkipati ◽  
E. Altermann ◽  
...  
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Mycoplasma Ovipneumoniae

The genome of New Zealand Mycoplasma ovipneumoniae isolate 90 was sequenced and assembled using an Illumina MiSeq system and combining the built-in Geneious de novo and Velvet de novo assemblers. The 1,031,345-bp-long genome harbored 711 genes with a coding percentage of 86.6.

scholarly journals Draft Genome Sequence of Psychrobacter okhotskensis Strain 5179-1A, Isolated from a Raw Cured Ham Storage Crate

2020 ◽  
Vol 9 (29) ◽  
Author(s):  
Joseph Wambui ◽  
Marina Morach ◽  
Nicole Cernela ◽  
Marc J. A. Stevens ◽  
Giovanni Ghielmetti ◽  
...  
Keyword(s):  
16S Rrna ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Rrna Sequences ◽  
16S Rrna Sequences

ABSTRACT We present the draft genome sequence of Psychrobacter okhotskensis strain 5179-1A, which was isolated from a raw cured ham storage crate. Its size and GC content are 3.4 Mb and 43.4%, respectively. The 16S rRNA sequences of strain 5179-1A and P. okhotskensis MD17T are 100% identical.

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