The First Attempt at Studying the Species Diversity of Fish in Lake Khanka Using DNA Barcoding Techniques

2019 ◽  
Vol 55 (4) ◽  
pp. 464-472
Author(s):  
S. V. Turanov ◽  
Y. Ph. Kartavtsev ◽  
M. E. Shapovalov
2012 ◽  
Vol 131 (5) ◽  
pp. 1337-1353 ◽  
Author(s):  
Laura Armenise ◽  
Marco C. Simeone ◽  
Roberta Piredda ◽  
Bartolomeo Schirone

2010 ◽  
Vol 10 (5) ◽  
pp. 397-408 ◽  
Author(s):  
Torbjørn Ekrem ◽  
Elisabeth Stur ◽  
Paul D. N. Hebert

Botany ◽  
2008 ◽  
Vol 86 (7) ◽  
pp. 773-789 ◽  
Author(s):  
Gary W. Saunders

The field of DNA barcoding is working towards generating a genetic system for the quick and accurate identification of eukaryotic species. For the more systematic minded, however, DNA barcoding offers a new approach towards screening and uniting large numbers of biological specimens in genetic groups as a first step towards assigning them to species and genera in an approach best termed “molecular-assisted alpha taxonomy”. This approach is particularly amenable in organisms with simple morphologies, a propensity for convergence, extensive phenotypic plasticity, and life histories with an alternation of heteromorphic generations. It is hard to imagine a group of organisms better defined by all of these traits than the marine macroalgae. In an effort to assess the utility of the DNA barcode (COI-5′) for testing the current concepts of biodiversity of marine macroalgae in Canada, a study to assess species diversity in the red algal family, Dumontiaceae, was initiated. Through this work I confirm the presence in Canadian waters of Dilsea californica (J. Agardh) Kuntze, Dilsea integra (Kjellman) Rosenvinge, and Neodilsea borealis (I.A. Abbott) Lindstrom of the Dilsea–Neodilsea complex, and Weeksia coccinea (Harvey) Lindstrom for the genus Weeksia . However, our work has uncovered two additional species of the former complex, Dilsea lindstromiae Saunders sp. nov. and Dilsea pygmaea (Setchell) Setchell, and an additional species of the latter, Weeksia reticulata Setchell, effectively doubling representation of these foliose dumontiacean genera in Canadian waters.


PLoS ONE ◽  
2016 ◽  
Vol 11 (12) ◽  
pp. e0167203 ◽  
Author(s):  
Bruno César Rossini ◽  
Carlos Alexandre Miranda Oliveira ◽  
Filipe Augusto Gonçalves de Melo ◽  
Vinicius de Araújo Bertaco ◽  
Juan M. Díaz de Astarloa ◽  
...  

PLoS ONE ◽  
2016 ◽  
Vol 11 (2) ◽  
pp. e0148602 ◽  
Author(s):  
Taeman Han ◽  
Wonhoon Lee ◽  
Seunghwan Lee ◽  
In Gyun Park ◽  
Haechul Park

2021 ◽  
Vol 944 (1) ◽  
pp. 012033
Author(s):  
I G W D Dharmawan ◽  
D G Bengen ◽  
I Setyobudiandi ◽  
B Subhan ◽  
I Verawati ◽  
...  

Abstract Nudibranch has high species diversity with complex morphological characters and is challenging to identify at the species level. The lack of knowledge about nudibranchs makes it difficult to identify conventionally using morphological characters. This study aims to identify nudibranchs at the species level using the DNA barcoding method from the mitochondrial cytochrome oxidase 1 (CO1) gen. The results of DNA barcoding using the Cytochrome Oxidase I (COI) gene showed 18 species of 51 samples analyzed. The phylogenetic tree reconstruction revealed 11 main clades belonging to 11 genera. The genetic distance between and within species clearly shows the difference between individuals. Interspecific genetic distance shows the lowest value between species was found between Chromodoris annae and Chromodoris magnifica is 0.075, and the largest genetic distance observed between species Glossodoris rufomarginata and Tritonidae sp is 0.354. This study shows molecular analysis can be used to identify nudibranch up to species level, which will be a source of information in knowing the distribution and the genetic distance.


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