MINING TANDEM MASS SPECTRAL DATA TO DEVELOP A MORE ACCURATE MASS ERROR MODEL FOR PEPTIDE IDENTIFICATION

Biocomputing 2007 ◽

10.1142/9789812772435_0040 ◽

2006 ◽

Author(s):

YAN FU ◽

WEN GAO ◽

SIMIN HE ◽

RUIXIANG SUN ◽

HU ZHOU ◽

...

Keyword(s):

Spectral Data ◽

Peptide Identification ◽

Error Model ◽

Accurate Mass ◽

Tandem Mass ◽

Mass Spectral Data ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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Evaluation of the sensitivity of the ‘Wiley registry of tandem mass spectral data, MSforID’ with MS/MS data of the ‘NIST/NIH/EPA mass spectral library’

Journal of Mass Spectrometry ◽

10.1002/jms.3184 ◽

2013 ◽

Vol 48 (4) ◽

pp. 487-496 ◽

Author(s):

Herbert Oberacher ◽

Graeme Whitley ◽

Bernd Berger

Keyword(s):

Spectral Data ◽

Tandem Mass ◽

Mass Spectral Library ◽

Spectral Library ◽

Mass Spectral Data ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

Journal of the American Society for Mass Spectrometry ◽

10.1016/1044-0305(94)80016-2 ◽

1994 ◽

Vol 5 (11) ◽

pp. 976-989 ◽

Cited By ~ 4235

Author(s):

Jimmy K. Eng ◽

Ashley L. McCormack ◽

John R. Yates

Keyword(s):

Spectral Data ◽

Amino Acid Sequences ◽

Tandem Mass ◽

Mass Spectral Data ◽

Protein Database ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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The H-Index of ‘An Approach to Correlate Tandem Mass Spectral Data of Peptides with Amino Acid Sequences in a Protein Database’

Journal of the American Society for Mass Spectrometry ◽

10.1007/s13361-015-1181-3 ◽

2015 ◽

Vol 26 (11) ◽

pp. 1799-1803 ◽

Author(s):

Michael P. Washburn

Keyword(s):

Spectral Data ◽

Amino Acid Sequences ◽

Tandem Mass ◽

Mass Spectral Data ◽

Protein Database ◽

H Index ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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A review of methods for interpretation of glycopeptide tandem mass spectral data

Glycoconjugate Journal ◽

10.1007/s10719-015-9633-3 ◽

2015 ◽

Vol 33 (3) ◽

pp. 285-296 ◽

Author(s):

Han Hu ◽

Kshitij Khatri ◽

Joshua Klein ◽

Nancy Leymarie ◽

Joseph Zaia

Keyword(s):

Spectral Data ◽

Tandem Mass ◽

Mass Spectral Data ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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Testing an alternative search algorithm for compound identification with the ‘Wiley Registry of Tandem Mass Spectral Data, MSforID’

Journal of Mass Spectrometry ◽

10.1002/jms.3185 ◽

2013 ◽

Vol 48 (4) ◽

pp. 497-504 ◽

Author(s):

Herbert Oberacher ◽

Graeme Whitley ◽

Bernd Berger ◽

Wolfgang Weinmann

Keyword(s):

Spectral Data ◽

Search Algorithm ◽

Tandem Mass ◽

Compound Identification ◽

Mass Spectral Data ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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Statistical Models for Protein Validation Using Tandem Mass Spectral Data and Protein Amino Acid Sequence Databases

Analytical Chemistry ◽

10.1021/ac035112y ◽

2004 ◽

Vol 76 (6) ◽

pp. 1664-1671 ◽

Author(s):

Rovshan G. Sadygov ◽

Hongbin Liu ◽

John R. Yates

Keyword(s):

Amino Acid Sequence ◽

Spectral Data ◽

Statistical Models ◽

Tandem Mass ◽

Mass Spectral Data ◽

Protein Amino Acid ◽

Mass Spectral ◽

Protein Amino Acid Sequence ◽

Tandem Mass Spectral Data

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An evaluation for cross-species proteomics research by publicly available expressed sequence tag database search using tandem mass spectral data

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.2631 ◽

2006 ◽

Vol 20 (18) ◽

pp. 2635-2640 ◽

Author(s):

Mei Huang ◽

Tong Chen ◽

ZhuLong Chan

Keyword(s):

Spectral Data ◽

Expressed Sequence Tag ◽

Database Search ◽

Tandem Mass ◽

Mass Spectral Data ◽

Mass Spectral ◽

Proteomics Research ◽

Expressed Sequence ◽

Tandem Mass Spectral Data

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Efficiency improvement of peptide identification for an organism without complete genome sequence, using expressed sequence tag database and tandem mass spectral data

10.1002/pmic.200300620 ◽

2003 ◽

Vol 3 (12) ◽

pp. 2305-2309 ◽

Author(s):

Kyung-Hoon Kwon ◽

Mioak Kim ◽

Jin Young Kim ◽

Kyung Wook Kim ◽

Seung Il Kim ◽

...

Keyword(s):

Complete Genome Sequence ◽

Complete Genome ◽

Expressed Sequence Tag ◽

Peptide Identification ◽

Tandem Mass ◽

Efficiency Improvement ◽

Mass Spectral Data ◽

Mass Spectral ◽

Expressed Sequence ◽

Tandem Mass Spectral Data

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A proteomic tool for protein identification from tandem mass spectral data

10.1002/pmic.200401033 ◽

2005 ◽

Vol 5 (4) ◽

pp. 853-855 ◽

Author(s):

Yupeng Zhao ◽

Yen-Han Lin

Keyword(s):

Spectral Data ◽

Protein Identification ◽

Tandem Mass ◽

Mass Spectral Data ◽

Mass Spectral ◽

Tandem Mass Spectral Data

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Isotope pattern vector based tandem mass spectral data calibration for improved peptide and protein identification

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.4272 ◽

2009 ◽

Vol 23 (21) ◽

pp. 3448-3456 ◽

Author(s):

Jingfen Zhang ◽

Dong Xu ◽

Wen Gao ◽

Guohui Lin ◽

Simin He

Keyword(s):

Spectral Data ◽

Protein Identification ◽

Tandem Mass ◽

Mass Spectral Data ◽

Mass Spectral ◽

Isotope Pattern ◽

Pattern Vector ◽

Tandem Mass Spectral Data ◽

Data Calibration

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