THE HUFFMAN-LIKE ALIGNMENT IN MANIFOLD LEARNING

Author(s):  
ZHENGMING MA ◽  
JING CHEN

In manifold learning, the neighborhood is often called a patch of the manifold, and the corresponding open set is called the local coordinate of the patch. The so-called alignment is to align the local coordinates in the d-dimensional Euclidean space to get the global coordinate of the manifold. There are two kinds of alignment methods: global and progressive alignment methods. The global alignment methods align the local coordinates of the manifold all at one time by solving an eigenvalue problem. The progressive alignment methods often take the local coordinate of a patch as the basic local coordinate and then attach other local ordinates to the basic local coordinate patch-by-patch until the basic local coordinate evolves into the global coordinate of the manifold. In this paper, a new progressive alignment method is proposed, where only the local coordinates of the two patches with the largest intersection at the current stage of progressive alignment will be aligned into a larger local coordinate. It is inspired by the famous Huffman coding, where two random events with the smallest probabilities at the current phase will be merged into a random event with a larger probability. Therefore, the proposed method is a Huffman-like alignment method. The experiments on benchmark data show that the proposed method outperforms both the global alignment methods and the other progressive alignment methods and is more robust to the changes of data size. The experiments on real-world data show the feasibility of the proposed method.

Author(s):  
TIANHAO ZHANG ◽  
XUELONG LI ◽  
DACHENG TAO ◽  
JIE YANG

Manifold learning has been demonstrated as an effective way to represent intrinsic geometrical structure of samples. In this paper, a new manifold learning approach, named Local Coordinates Alignment (LCA), is developed based on the alignment technique. LCA first obtains local coordinates as representations of local neighborhood by preserving proximity relations on a patch, which is Euclidean. Then, these extracted local coordinates are aligned to yield the global embeddings. To solve the out of sample problem, linearization of LCA (LLCA) is proposed. In addition, in order to solve the non-Euclidean problem in real world data when building the locality, kernel techniques are utilized to represent similarity of the pairwise points on a local patch. Empirical studies on both synthetic data and face image sets show effectiveness of the developed approaches.


2015 ◽  
Vol 2015 ◽  
pp. 1-18 ◽  
Author(s):  
Dong Liang ◽  
Chen Qiao ◽  
Zongben Xu

The problems of improving computational efficiency and extending representational capability are the two hottest topics in approaches of global manifold learning. In this paper, a new method called extensive landmark Isomap (EL-Isomap) is presented, addressing both topics simultaneously. On one hand, originated from landmark Isomap (L-Isomap), which is known for its high computational efficiency property, EL-Isomap also possesses high computational efficiency through utilizing a small set of landmarks to embed all data points. On the other hand, EL-Isomap significantly extends the representational capability of L-Isomap and other global manifold learning approaches by utilizing only an available subset from the whole landmark set instead of all to embed each point. Particularly, compared with other manifold learning approaches, the data manifolds with intrinsic low-dimensional concave topologies and essential loops can be unwrapped by the new method more successfully, which are shown by simulation results on a series of synthetic and real-world data sets. Moreover, the accuracy, robustness, and computational complexity of EL-Isomap are analyzed in this paper, and the relation between EL-Isomap and L-Isomap is also discussed theoretically.


2011 ◽  
Vol 32 (2) ◽  
pp. 181-189 ◽  
Author(s):  
Peng Zhang ◽  
Hong Qiao ◽  
Bo Zhang

2014 ◽  
Vol 23 (3) ◽  
pp. 261-275 ◽  
Author(s):  
Widad Kartous ◽  
Abdesslem Layeb ◽  
Salim Chikhi

AbstractMultiple sequence alignment (MSA) is one of the major problems that can be encountered in the bioinformatics field. MSA consists in aligning a set of biological sequences to extract the similarities between them. Unfortunately, this problem has been shown to be NP-hard. In this article, a new algorithm was proposed to deal with this problem; it is based on a quantum-inspired cuckoo search algorithm. The other feature of the proposed approach is the use of a randomized progressive alignment method based on a hybrid global/local pairwise algorithm to construct the initial population. The results obtained by this hybridization are very encouraging and show the feasibility and effectiveness of the proposed solution.


2001 ◽  
Vol 2 (1) ◽  
pp. 113 ◽  
Author(s):  
Gabriel Soler López

<p>Given a differential equation on an open set O of an n-manifold we can associate to it a pseudo-flow, that is, a flow whose trajectories may not be defined in the entire real line. In this paper we prove that this pseudo-flow is always equivalent to a flow with its trajectories defined in all R. This result extends a similar result of Vinograd stated in the n-dimensional Euclidean space.</p>


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