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Abstract 5144: Comparative Exonic Quantification analyzer (CEQer): a graphical, event-driven tool for copy number and allelic imbalance detection from whole-exome sequencing data.
Mapping Intimacies
◽
10.1158/1538-7445.am2013-5144
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2013
◽
Author(s):
Rocco Piazza
◽
Vera Magistroni
◽
Alessandra Pirola
◽
Sara Redaelli
◽
Roberta Spinelli
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Allelic Imbalance
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Event Driven
◽
Whole Exome Sequencing Data
Download Full-text
Related Documents
Cited By
References
CEQer: A Graphical Tool for Copy Number and Allelic Imbalance Detection from Whole-Exome Sequencing Data
PLoS ONE
◽
10.1371/journal.pone.0074825
◽
2013
◽
Vol 8
(10)
◽
pp. e74825
◽
Cited By ~ 16
Author(s):
Rocco Piazza
◽
Vera Magistroni
◽
Alessandra Pirola
◽
Sara Redaelli
◽
Roberta Spinelli
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Allelic Imbalance
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Graphical Tool
◽
Whole Exome Sequencing Data
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ExomeAI: detection of recurrent allelic imbalance in tumors using whole-exome sequencing data
Bioinformatics
◽
10.1093/bioinformatics/btu665
◽
2014
◽
Vol 31
(3)
◽
pp. 429-431
◽
Cited By ~ 12
Author(s):
Javad Nadaf
◽
Jacek Majewski
◽
Somayyeh Fahiminiya
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Allelic Imbalance
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
Evaluation of somatic copy number estimation tools for whole-exome sequencing data
Briefings in Bioinformatics
◽
10.1093/bib/bbv055
◽
2015
◽
Vol 17
(2)
◽
pp. 185-192
◽
Cited By ~ 26
Author(s):
Jae-Yong Nam
◽
Nayoung K. D. Kim
◽
Sang Cheol Kim
◽
Je-Gun Joung
◽
Ruibin Xi
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Sequencing Data
◽
Copy Number Estimation
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data
Nucleic Acids Research
◽
10.1093/nar/gkv556
◽
2015
◽
Vol 43
(W1)
◽
pp. W289-W294
◽
Cited By ~ 13
Author(s):
Yuanwei Zhang
◽
Zhenhua Yu
◽
Rongjun Ban
◽
Huan Zhang
◽
Furhan Iqbal
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Copy Number Variations
◽
Online Detection
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
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Using XHMM Software to Detect Copy Number Variation in Whole‐Exome Sequencing Data
Current Protocols in Human Genetics
◽
10.1002/0471142905.hg0723s81
◽
2014
◽
Vol 81
(1)
◽
Cited By ~ 41
Author(s):
Menachem Fromer
◽
Shaun M. Purcell
Keyword(s):
Copy Number Variation
◽
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
◽
Number Variation
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CANOES: detecting rare copy number variants from whole exome sequencing data
Nucleic Acids Research
◽
10.1093/nar/gku345
◽
2014
◽
Vol 42
(12)
◽
pp. e97-e97
◽
Cited By ~ 62
Author(s):
Daniel Backenroth
◽
Jason Homsy
◽
Laura R. Murillo
◽
Joe Glessner
◽
Edwin Lin
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Copy Number Variants
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
An Evaluation of Copy Number Variation Detection Tools from Whole-Exome Sequencing Data
Human Mutation
◽
10.1002/humu.22537
◽
2014
◽
Vol 35
(7)
◽
pp. 899-907
◽
Cited By ~ 135
Author(s):
Renjie Tan
◽
Yadong Wang
◽
Sarah E. Kleinstein
◽
Yongzhuang Liu
◽
Xiaolin Zhu
◽
...
Keyword(s):
Copy Number Variation
◽
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
◽
Number Variation
◽
Copy Number Variation Detection
Download Full-text
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
Genome Biology
◽
10.1186/gb-2013-14-10-r120
◽
2013
◽
Vol 14
(10)
◽
pp. R120
◽
Cited By ~ 151
Author(s):
Alberto Magi
◽
Lorenzo Tattini
◽
Ingrid Cifola
◽
Romina D’Aurizio
◽
Matteo Benelli
◽
...
Keyword(s):
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Copy Number Variants
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
An efficient noise reduction method for copy number variations detection from whole exome sequencing data
2016 International Conference on High Performance Computing & Simulation (HPCS)
◽
10.1109/hpcsim.2016.7568451
◽
2016
◽
Author(s):
Jinhwa Kong
◽
Jaemoon Shin
◽
Jungim Won
◽
Jeehee Yoon
◽
Unjoo Lee
Keyword(s):
Noise Reduction
◽
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Reduction Method
◽
Copy Number Variations
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
Gene-based comparative analysis of tools for estimating copy number alterations using whole-exome sequencing data
Oncotarget
◽
10.18632/oncotarget.15932
◽
2017
◽
Vol 8
(16)
◽
pp. 27277-27285
◽
Cited By ~ 8
Author(s):
Hyung-Yong Kim
◽
Jin-Woo Choi
◽
Jeong-Yeon Lee
◽
Gu Kong
Keyword(s):
Comparative Analysis
◽
Exome Sequencing
◽
Whole Exome Sequencing
◽
Copy Number
◽
Copy Number Alterations
◽
Sequencing Data
◽
Exome Sequencing Data
◽
Whole Exome
◽
Whole Exome Sequencing Data
Download Full-text
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